Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC063943.3-201ENST00000615562 356 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 AC007014.2-201ENST00000615581 479 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM38O00635 uc_338.13-201ENST00000618243 179 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM38O00635 CRYM-AS1-204ENST00000637983 556 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM38O00635 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM38O00635 AL354685.2-201ENST00000448218 1447 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM38O00635 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM38O00635 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM38O00635 LINC00622-201ENST00000562811 1570 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 AL049780.3-201ENST00000624612 1583 ntBASIC4.34□□□□□ -1.71
TRIM38O00635 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM38O00635 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM38O00635 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
TRIM38O00635 AC006378.2-201ENST00000623178 2476 ntBASIC4.34□□□□□ -1.72
TRIM38O00635 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.34□□□□□ -1.72
TRIM38O00635 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 NXPH1-205ENST00000602349 1953 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 FGF7P2-201ENST00000332473 296 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 MIR383-201ENST00000362257 73 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 Y_RNA.234-201ENST00000364409 97 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 RNU6-744P-201ENST00000365557 107 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 RNU6-1316P-201ENST00000384242 108 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 Y_RNA.554-201ENST00000384672 102 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AL022722.2-201ENST00000402519 180 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 RPL23AP48-201ENST00000406913 488 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 AC245054.1-201ENST00000420944 258 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM38O00635 AL391219.1-201ENST00000422570 483 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 RPL23AP38-201ENST00000423801 469 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 HMGB1P31-201ENST00000437242 427 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 LSM1P1-201ENST00000438629 273 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 TRIM60P18-201ENST00000441518 828 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AL662791.1-201ENST00000441992 928 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 AL359073.1-201ENST00000448036 403 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC012671.1-201ENST00000451912 203 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AL121877.1-201ENST00000453704 622 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 RPS27AP17-201ENST00000463344 455 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 ST13P14-201ENST00000474095 734 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 MTCO2P30-201ENST00000503662 364 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 VWA8P1-201ENST00000510889 176 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 AC025465.4-201ENST00000513422 638 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC034159.1-201ENST00000513885 583 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM38O00635 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM38O00635 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 OR5M7P-201ENST00000526140 972 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM38O00635 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM38O00635 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM38O00635 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 AC093227.2-201ENST00000589357 285 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC009994.1-201ENST00000606889 253 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC097468.3-201ENST00000607956 456 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 AC090970.3-201ENST00000612566 866 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 U4.5-201ENST00000617137 123 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 AC099654.5-201ENST00000636479 350 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 MTND1P37-201ENST00000636562 264 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 MIR492-201ENST00000638676 116 ntBASIC4.33□□□□□ -1.72
TRIM38O00635 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
TRIM38O00635 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM38O00635 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM38O00635 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TRIM38O00635 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TRIM38O00635 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM38O00635 ZNF680P1-201ENST00000436625 1469 ntBASIC4.32□□□□□ -1.72
TRIM38O00635 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms