Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.12□□□□□ -1.91
AP3B1O00203 AL590639.1-201ENST00000456484 337 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 BOLA3P3-201ENST00000505182 232 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.12□□□□□ -1.91
AP3B1O00203 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.12□□□□□ -1.91
AP3B1O00203 SNORA67.7-201ENST00000516664 135 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC104986.1-201ENST00000517978 436 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
AP3B1O00203 AC087272.1-201ENST00000523624 533 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 DEFB108D-201ENST00000527787 222 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
AP3B1O00203 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.12□□□□□ -1.91
AP3B1O00203 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3B1O00203 MIR3921-201ENST00000577308 85 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 ZNF415P1-201ENST00000582279 1166 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.12□□□□□ -1.91
AP3B1O00203 CCDC58P3-201ENST00000590792 430 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC013444.2-201ENST00000603317 787 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 ELOCP35-201ENST00000604289 336 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AL031176.1-201ENST00000604554 466 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC019159.1-201ENST00000605094 187 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC245389.1-201ENST00000605141 529 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC131902.3-201ENST00000611767 581 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC027309.3-201ENST00000623419 351 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3B1O00203 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
AP3B1O00203 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3B1O00203 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
AP3B1O00203 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
AP3B1O00203 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3B1O00203 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3B1O00203 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3B1O00203 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3B1O00203 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3B1O00203 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AP3B1O00203 RPL23AP57-201ENST00000332361 466 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP3B1O00203 MIR7-3-201ENST00000384898 110 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP3B1O00203 AC069157.1-201ENST00000421749 137 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.11□□□□□ -1.91
AP3B1O00203 AC109583.1-201ENST00000432156 268 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP3B1O00203 RAC1P7-201ENST00000445367 377 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3B1O00203 AC010099.1-201ENST00000455434 375 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 RN7SL633P-201ENST00000488974 297 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 RPL7P23-201ENST00000493874 747 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 RPL21P131-201ENST00000497298 483 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3B1O00203 AC025768.1-201ENST00000510057 267 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 RAC1P5-201ENST00000512182 576 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
AP3B1O00203 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.11□□□□□ -1.91
AP3B1O00203 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.11□□□□□ -1.91
AP3B1O00203 SETP7-201ENST00000552169 453 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3B1O00203 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3B1O00203 AC091057.2-201ENST00000602594 792 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3B1O00203 AP003973.1-201ENST00000604639 691 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AC006133.1-201ENST00000617106 264 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3B1O00203 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3B1O00203 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
AP3B1O00203 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3B1O00203 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3B1O00203 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
AP3B1O00203 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
AP3B1O00203 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP3B1O00203 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
AP3B1O00203 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.1□□□□□ -1.91
AP3B1O00203 AC024341.1-201ENST00000526444 1552 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
AP3B1O00203 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP3B1O00203 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
AP3B1O00203 SNORD56.5-201ENST00000364281 72 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 RNA5SP72-201ENST00000364442 117 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP3B1O00203 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.1□□□□□ -1.91
AP3B1O00203 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 U6.112-201ENST00000384129 70 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 RNU6-1197P-201ENST00000391183 107 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 RNU2-28P-201ENST00000410457 189 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.1□□□□□ -1.91
AP3B1O00203 BX664727.1-201ENST00000416024 466 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 KRR1P1-201ENST00000419430 803 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.1□□□□□ -1.91
AP3B1O00203 MTCO3P1-205ENST00000422088 832 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.1□□□□□ -1.91
AP3B1O00203 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.1□□□□□ -1.91
AP3B1O00203 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.1□□□□□ -1.91
AP3B1O00203 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms