Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-906P-201ENST00000384700 70 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 RNU6-821P-201ENST00000390995 107 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM1O00151 MTND4P13-201ENST00000402078 1023 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 ERHP2-201ENST00000402323 299 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 RN7SKP27-201ENST00000410684 333 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM1O00151 MTND2P9-201ENST00000422293 931 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC006548.1-201ENST00000427470 102 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 SAR1AP4-201ENST00000429225 591 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.22□□□□□ -1.89
PDLIM1O00151 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.22□□□□□ -1.89
PDLIM1O00151 snoU13.24-201ENST00000458998 104 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC091564.1-201ENST00000464563 479 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC114322.1-201ENST00000506771 926 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 HMGB1P28-201ENST00000507778 552 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 HMGN1P11-201ENST00000508668 303 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 RNU6-415P-201ENST00000516252 97 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.22□□□□□ -1.89
PDLIM1O00151 AC125611.1-201ENST00000549563 229 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.22□□□□□ -1.89
PDLIM1O00151 AP001269.3-201ENST00000588718 329 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC067852.3-201ENST00000589177 561 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.22□□□□□ -1.89
PDLIM1O00151 AC027449.1-201ENST00000608890 407 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 AC069209.1-201ENST00000619282 651 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC092650.2-201ENST00000619984 902 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 AC120349.2-201ENST00000625002 298 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 CR381572.1-201ENST00000625098 102 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 MTCO1P23-201ENST00000415223 1526 ntBASIC3.22□□□□□ -1.89
PDLIM1O00151 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.22□□□□□ -1.89
PDLIM1O00151 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM1O00151 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDLIM1O00151 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.22□□□□□ -1.89
PDLIM1O00151 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.21□□□□□ -1.89
PDLIM1O00151 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDLIM1O00151 SNRPEP3-201ENST00000338402 276 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 FRG1CP-201ENST00000358464 769 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RNU6-560P-201ENST00000364007 108 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PDLIM1O00151 DEFB109C-201ENST00000382575 264 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 DEFB109B-201ENST00000382656 264 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 Y_RNA.408-201ENST00000383987 102 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RNU6-1122P-201ENST00000384449 107 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RNU6-636P-201ENST00000384598 107 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 ATP5F1P3-201ENST00000397213 657 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RNA5SP80-201ENST00000410475 111 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.21□□□□□ -1.9
PDLIM1O00151 AC012065.2-201ENST00000421295 375 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 HMGB3P11-201ENST00000440127 604 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 MTCO2P25-201ENST00000447065 681 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RPL39P6-201ENST00000448289 150 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RPS24P6-201ENST00000452670 400 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.21□□□□□ -1.9
PDLIM1O00151 NECAP1P2-201ENST00000455668 727 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RPL21P129-201ENST00000491732 478 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.21□□□□□ -1.9
PDLIM1O00151 AC098799.2-201ENST00000509466 868 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 AC004062.1-201ENST00000509926 645 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RNU1-61P-201ENST00000516107 151 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 RNA5SP468-201ENST00000516782 93 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
PDLIM1O00151 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.21□□□□□ -1.9
PDLIM1O00151 MIR4444-1-201ENST00000581696 74 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 MIR4444-2-201ENST00000584390 74 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDLIM1O00151 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.21□□□□□ -1.9
PDLIM1O00151 AC009974.1-201ENST00000608881 455 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 AC107871.2-201ENST00000612894 502 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 AC018755.4-201ENST00000619715 454 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.21□□□□□ -1.9
PDLIM1O00151 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.21□□□□□ -1.9
PDLIM1O00151 AC119674.1-207ENST00000641355 633 ntBASIC3.21□□□□□ -1.9
PDLIM1O00151 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDLIM1O00151 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PDLIM1O00151 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDLIM1O00151 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDLIM1O00151 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM1O00151 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM1O00151 SNORA62.3-201ENST00000365110 153 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 SNORD116.1-201ENST00000365628 92 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 RNU6-629P-201ENST00000384061 103 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 Y_RNA.465-201ENST00000384293 102 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AL450338.1-201ENST00000407987 512 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM1O00151 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM1O00151 CYCSP4-201ENST00000429682 331 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AL050321.1-201ENST00000432363 400 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 ATP5F1P1-201ENST00000433775 569 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms