Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU1-13P-201ENST00000384499 162 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 RNA5SP80-201ENST00000410475 111 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC079780.1-201ENST00000428259 207 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AL445584.1-201ENST00000431451 330 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL35AP22-201ENST00000436855 335 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 NANOGNBP1-201ENST00000448444 480 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 MTATP6P7-201ENST00000453315 681 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC092155.2-201ENST00000454675 477 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 BX248409.1-201ENST00000455497 255 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL31P53-201ENST00000457065 348 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 CABYRP1-201ENST00000465493 1045 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC055731.1-201ENST00000474387 401 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 MTCO2P9-201ENST00000503214 694 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AL049874.4-201ENST00000557593 255 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 H3F3AP1-201ENST00000559984 334 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC103710.4-201ENST00000609301 899 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 OR10AB1P-201ENST00000609613 938 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 MLECP1-201ENST00000615893 709 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR7703-201ENST00000620784 77 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AP000346.3-201ENST00000622821 210 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC018445.2-201ENST00000622987 260 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AL513185.3-201ENST00000433335 1300 ntBASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CHKB-CPT1BH3BT56 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.28□□□□□ -2.21
CHKB-CPT1BH3BT56 AC012618.3-205ENST00000637896 1496 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU6-1249P-201ENST00000363237 111 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU6-525P-201ENST00000363685 104 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 RPS3AP24-201ENST00000407896 734 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 RNA5SP338-201ENST00000410495 85 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 RPS29P4-201ENST00000414733 161 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 USP12PX-201ENST00000432383 1057 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 XKRY2-201ENST00000442362 1093 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 PPIAP20-201ENST00000449839 135 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC106707.2-201ENST00000484182 374 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 MTCYBP17-201ENST00000503579 789 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 HMGB3P17-201ENST00000504195 649 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 CBX3P3-201ENST00000508108 532 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 MRPS17P9-201ENST00000511924 393 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 MRPS36P2-201ENST00000512569 299 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC074029.2-201ENST00000551045 634 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 HMGB1P6-201ENST00000569046 646 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC079089.3-201ENST00000603094 673 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 AC009093.8-201ENST00000641769 292 ntBASIC1.27□□□□□ -2.21
CHKB-CPT1BH3BT56 TAB3P1-202ENST00000452645 1634 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 SNORD62.1-201ENST00000362541 86 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU6-339P-201ENST00000384310 107 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 MIR676-201ENST00000390702 67 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 MIR1178-201ENST00000408396 91 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 RAB9AP3-201ENST00000412737 573 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL31P63-201ENST00000422565 375 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 MTATP6P11-201ENST00000428071 670 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC112220.1-201ENST00000434628 355 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 NDUFB4P6-201ENST00000436819 366 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 RAB9AP1-201ENST00000449393 573 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 PNPLA4P1-201ENST00000458328 305 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 KLF3P2-201ENST00000465138 268 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms