Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 XIAPP3-201ENST00000312918 795 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC126755.2-208ENST00000327792 462 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC138969.1-213ENST00000331436 462 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 SNORA62-201ENST00000365493 153 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 RNU6-601P-201ENST00000384540 107 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 RPL30P2-201ENST00000414021 291 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 RPL23AP89-201ENST00000439324 255 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 TXNP1-201ENST00000441872 371 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 PTP4A1P4-201ENST00000512479 322 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 RNU6-976P-201ENST00000516086 111 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 HMGB1P19-201ENST00000517578 577 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC027287.1-201ENST00000553115 1453 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC106782.4-201ENST00000568264 210 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AC116667.1-201ENST00000604855 2072 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AP000654.2-201ENST00000605633 586 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 SAMMSON-226ENST00000642089 1582 ntBASIC6.12□□□□□ -1.43
USP17L3A6NCW0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP17L3A6NCW0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC108751.5-201ENST00000492880 1336 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC011155.1-201ENST00000316512 456 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 MT-TC-201ENST00000387405 66 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 GLULP6-201ENST00000399502 913 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 RNU4-65P-201ENST00000410473 140 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 RN7SKP100-201ENST00000411258 284 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 RPL21P24-201ENST00000413752 448 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 RAC1P6-201ENST00000423911 575 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 SKA2P1-201ENST00000425592 390 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC068287.1-201ENST00000430283 295 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC234775.1-201ENST00000454247 670 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 SCARNA18-201ENST00000459004 134 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 TRBV1-201ENST00000476502 284 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC079140.5-201ENST00000507882 310 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AF038458.1-201ENST00000588406 262 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC006006.1-201ENST00000603082 144 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AL670379.10-201ENST00000604330 253 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AL670379.9-201ENST00000605428 253 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AL138960.1-201ENST00000613838 513 ntBASIC6.11□□□□□ -1.43
USP17L3A6NCW0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
USP17L3A6NCW0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms