Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Y_RNA.556-201ENST00000384677 113 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 RNA5SP56-201ENST00000410277 118 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 RNA5SP111-201ENST00000411386 101 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 RPS23P10-201ENST00000416185 486 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 CYCSP10-201ENST00000417973 294 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AL137014.1-201ENST00000420490 1226 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 RPL21P109-201ENST00000422213 475 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AL391219.1-201ENST00000422570 483 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC008267.5-201ENST00000424928 265 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 BX323845.3-201ENST00000428215 527 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AL669831.1-202ENST00000428504 417 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 BTF3P6-201ENST00000448054 499 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 CECR9-201ENST00000453421 199 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 YWHAEP1-201ENST00000453697 763 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC108161.1-201ENST00000461060 402 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC068228.1-201ENST00000461723 211 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 NDUFB5P1-201ENST00000508134 564 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 RNU6-307P-201ENST00000516743 106 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 FTH1P11-201ENST00000517577 551 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 OR8R1P-201ENST00000543943 764 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC007956.1-201ENST00000555623 542 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC124916.2-201ENST00000604416 224 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC245014.3-201ENST00000618589 347 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 MIR4275-201ENST00000636486 87 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 AC006484.1-201ENST00000435086 1884 ntBASIC4.7□□□□□ -1.66
SHISA3A0PJX4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.7□□□□□ -1.66
SHISA3A0PJX4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RNU6-190P-201ENST00000384154 102 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.574-201ENST00000384766 95 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC004386.1-201ENST00000393214 761 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RNU6-293P-201ENST00000411259 106 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RPL7P37-201ENST00000425095 738 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 USMG5P1-201ENST00000425964 177 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC016712.1-201ENST00000431088 378 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC236972.1-201ENST00000433225 199 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AL161722.2-201ENST00000434731 981 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 HIGD1AP11-201ENST00000438361 280 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC008264.1-201ENST00000447612 367 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 SNORD5.1-201ENST00000458800 75 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RPS23P6-201ENST00000466136 431 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC104472.2-201ENST00000469035 601 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC117503.1-201ENST00000472241 394 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC103987.1-201ENST00000473394 348 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 HMGB1P30-201ENST00000492455 606 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC104136.1-201ENST00000512969 394 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RNU6-1332P-201ENST00000516666 104 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RNU6-352P-201ENST00000516908 107 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RNU6-1271P-201ENST00000517049 105 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC087854.1-201ENST00000519706 414 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC090151.1-201ENST00000520784 730 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RNU6-323P-201ENST00000521915 107 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC005363.1-201ENST00000530779 351 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms