Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV5-5A0A0J9YX44 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 RNU6-600P-201ENST00000362524 99 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 RNY4P24-201ENST00000362735 96 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 RNU5F-6P-201ENST00000362979 116 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 Y_RNA.97-201ENST00000363094 102 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 Y_RNA.548-201ENST00000384656 105 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 U3.20-201ENST00000390909 217 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AL603766.1-201ENST00000407763 664 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 MIR1302-8-201ENST00000408342 128 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 CCDC58P2-201ENST00000417131 366 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC009480.2-201ENST00000422916 432 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 OR8F1P-201ENST00000425243 930 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 MTND1P9-201ENST00000453775 944 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC234775.1-201ENST00000454247 670 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC092754.2-201ENST00000463506 460 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC096751.1-202ENST00000502691 1067 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC116347.2-201ENST00000514912 523 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AP003497.1-201ENST00000528472 562 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 OR5D17P-201ENST00000531492 978 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC009643.1-201ENST00000532030 391 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AL356057.1-201ENST00000533798 831 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC008011.1-201ENST00000545989 227 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 OR4K8P-201ENST00000578842 1048 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC008507.1-201ENST00000587506 734 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC244505.7-201ENST00000599675 272 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC015726.1-201ENST00000602353 681 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AL022161.1-201ENST00000604390 213 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 OR2AS2P-201ENST00000606902 342 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC091965.4-201ENST00000607691 587 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC012360.2-201ENST00000609349 391 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC015967.1-201ENST00000619893 476 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC093591.3-201ENST00000634516 308 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 ELL2P3-201ENST00000457883 1602 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 USP8P1-201ENST00000494673 3183 ntBASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV5-5A0A0J9YX44 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 FRG1BP-201ENST00000278882 761 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 SNORA26.8-201ENST00000391306 124 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 SKINT1L-201ENST00000401057 817 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 RPL21P65-201ENST00000406094 466 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC245028.1-201ENST00000423259 256 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AL158071.1-201ENST00000430315 461 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC109583.1-201ENST00000432156 268 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 MTND2P4-201ENST00000445034 1004 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC010655.1-201ENST00000449336 292 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 SBDSP1-204ENST00000453858 737 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 RPL5P32-201ENST00000454085 879 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AP1S2P1-201ENST00000457344 379 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AL139099.1-201ENST00000497398 403 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 RPL23AP55-201ENST00000498163 452 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 MLLT10P2-201ENST00000506434 249 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 KLHL2P1-201ENST00000508691 521 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 FTH1P9-201ENST00000513251 355 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 SCARNA14-201ENST00000516903 136 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC091515.1-201ENST00000548110 679 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 TGIF1P1-201ENST00000558095 802 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 AC009101.1-201ENST00000568135 242 ntBASIC3.2□□□□□ -1.9
TRBV5-5A0A0J9YX44 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms