Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC007991.1-201ENST00000522680 631 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MIR3915-201ENST00000578518 97 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AP001004.1-201ENST00000582468 324 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MIR5187-201ENST00000583479 76 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 WISP1-OT1-201ENST00000602893 642 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC012669.1-201ENST00000603209 283 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC128687.1-201ENST00000605304 619 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC011816.2-201ENST00000607089 556 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC097468.3-201ENST00000607956 456 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MIR7844-201ENST00000616161 122 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MIR6875-201ENST00000617506 72 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL354798.1-201ENST00000622505 329 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC092192.1-201ENST00000633154 1018 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC006927.3-201ENST00000638789 384 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC092447.10-201ENST00000620607 1652 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL157700.1-201ENST00000561973 1432 ntBASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC058791.1-201ENST00000608412 3198 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU6-359P-201ENST00000365466 108 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU6-744P-201ENST00000365557 107 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SNORA56-201ENST00000383966 129 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU6-1316P-201ENST00000384242 108 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 Y_RNA.560-201ENST00000384689 102 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU6-328P-201ENST00000390887 106 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL590704.1-201ENST00000402856 794 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MIR1305-201ENST00000408300 86 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU6-920P-201ENST00000410926 92 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 HSFY4P-201ENST00000415994 1181 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 TOMM22P1-201ENST00000418578 312 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPL17P36-201ENST00000420302 549 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC090960.1-201ENST00000421072 306 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 Z99497.1-201ENST00000421282 135 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MTND4LP10-201ENST00000435146 291 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 Z82190.1-201ENST00000454534 490 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPS20P32-201ENST00000456044 356 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPS4XP2-201ENST00000458402 793 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL133162.1-201ENST00000463228 453 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPL23AP62-201ENST00000463396 453 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC010401.1-201ENST00000463867 348 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MTND3P7-201ENST00000474435 343 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC093267.1-201ENST00000489176 961 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC106872.3-201ENST00000495104 446 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 NIPA2P2-201ENST00000496376 1083 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC022447.3-201ENST00000506865 495 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC034159.1-201ENST00000513885 583 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AP004371.1-201ENST00000525240 214 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MTCYBP22-201ENST00000603788 447 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL356585.4-201ENST00000623078 1229 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC127502.3-201ENST00000636170 1206 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC138649.5-201ENST00000637456 137 ntBASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MTND4P16-201ENST00000466108 1367 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms