Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 OR1M4P-201ENST00000589199 287 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 CYCSP1-201ENST00000604815 315 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AL670379.2-201ENST00000604983 252 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AC090607.5-201ENST00000615692 224 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AC007114.2-201ENST00000576014 4281 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AC008171.1-201ENST00000395058 200 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 RNU5E-9P-201ENST00000411164 104 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-516P-201ENST00000411381 104 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 HSPE1P25-201ENST00000455484 251 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AL445433.1-201ENST00000457507 257 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AC093270.2-201ENST00000486157 792 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AC010409.1-201ENST00000487382 476 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AC005726.1-201ENST00000494679 427 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 IGHVII-44-2-201ENST00000517728 250 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 ERHP1-201ENST00000523006 310 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 Z99571.1-201ENST00000636677 394 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
CCDC61Q9Y6R9 AP004607.3-201ENST00000530354 3915 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AC009229.4-201ENST00000623854 1947 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AC068870.1-201ENST00000563737 2455 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-937P-201ENST00000384325 106 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AL079342.1-201ENST00000401460 267 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AL139148.1-201ENST00000427122 680 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 RN7SL172P-201ENST00000460535 303 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 OR7H2P-201ENST00000513483 306 ntBASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC61Q9Y6R9 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 RNU6-834P-201ENST00000362367 110 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 U8.8-201ENST00000365399 135 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 RNY3P4-201ENST00000384428 101 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 MIR223-201ENST00000385204 110 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 RPL7L1P9-201ENST00000431298 745 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 AC133134.1-201ENST00000466800 359 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 RPS21P4-201ENST00000487122 248 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 AC135721.1-201ENST00000497954 479 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 AC113155.1-201ENST00000511141 769 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 AC108471.1-201ENST00000513977 287 ntBASIC7.83□□□□□ -1.16
CCDC61Q9Y6R9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms