Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 CYCSP32-201ENST00000440548 321 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC007000.2-201ENST00000442564 487 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 MTND5P8-201ENST00000449817 1083 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 OR5H5P-201ENST00000503164 928 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AIG1P1-201ENST00000503376 148 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 SNORA31.1-201ENST00000515993 133 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 SNORA31.5-201ENST00000516190 133 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC103833.1-201ENST00000517442 172 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 ERHP1-201ENST00000523006 310 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC004217.3-201ENST00000551552 878 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC090695.1-201ENST00000561269 1222 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 MIR4446-201ENST00000578505 67 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC096947.1-201ENST00000603233 470 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AL162274.2-201ENST00000614406 332 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 AC091046.2-201ENST00000620775 665 ntBASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
USH1CQ9Y6N9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC096644.4-201ENST00000563417 2912 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 CD24P4-201ENST00000382840 243 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 MIR525-201ENST00000384978 85 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 Z92545.1-201ENST00000411782 234 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 UBE2D3P2-201ENST00000424409 445 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC093422.3-201ENST00000428506 305 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AL513321.1-201ENST00000441175 761 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC111000.2-201ENST00000507775 550 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC091826.1-201ENST00000514065 313 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC138761.3-201ENST00000579993 334 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AL355812.1-201ENST00000603215 216 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC079880.2-201ENST00000603790 1213 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 BNIP3P11-201ENST00000603878 563 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC016542.1-201ENST00000608259 493 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC112503.2-201ENST00000609005 552 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AP001033.2-201ENST00000609701 1003 ntBASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.71□□□□□ -1.98
USH1CQ9Y6N9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AL356057.1-202ENST00000402263 756 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 ATF1P1-201ENST00000406040 927 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 RNA5SP181-201ENST00000410246 98 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 FNDC3CP-201ENST00000420795 1155 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 RPS6P14-201ENST00000425165 719 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 RPP40P1-201ENST00000426762 456 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 PTP4A1P3-201ENST00000433661 420 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AC112653.1-201ENST00000443851 386 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 MTND3P4-201ENST00000453537 303 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 SRIP1-201ENST00000489235 288 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 RPS27P27-201ENST00000498779 255 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AC009812.2-201ENST00000517657 457 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AC009220.3-201ENST00000604318 586 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 AP000676.4-201ENST00000624659 623 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 MTND2P41-201ENST00000637599 773 ntBASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
USH1CQ9Y6N9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms