Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.56□□□□□ -1.52
HRH3Q9Y5N1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AL121886.1-201ENST00000358609 435 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 SNORD8-201ENST00000363915 110 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 SNORA69.1-201ENST00000390904 137 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 RNU6-821P-201ENST00000390995 107 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 RNU6-817P-201ENST00000391083 104 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 PPIAP9-201ENST00000403866 498 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MIR548I2-201ENST00000408348 149 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 RNU6-603P-201ENST00000411403 107 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AP000275.1-201ENST00000411943 390 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AL391219.1-201ENST00000422570 483 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 CHEK2P5-201ENST00000423877 246 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 RPL30P3-201ENST00000424262 333 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 VTI1BP4-201ENST00000427516 527 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MTND6P12-201ENST00000428247 522 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 HMGB1P27-201ENST00000431429 603 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 PTMAP6-201ENST00000439110 327 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 NDUFB1P2-201ENST00000449477 176 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC092647.2-201ENST00000452998 253 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 PPIAP19-201ENST00000486414 492 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 RN7SL193P-201ENST00000491708 276 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 RPS4XP20-201ENST00000505751 772 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC114781.3-201ENST00000512083 142 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 RNU4-71P-201ENST00000516258 113 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC091144.1-201ENST00000519573 138 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC034114.1-201ENST00000520293 285 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC068790.4-201ENST00000602474 263 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MIR6809-201ENST00000612189 116 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MIR1244-1-201ENST00000612829 85 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MIR6886-201ENST00000619864 61 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AL031601.2-202ENST00000622650 282 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MIR1244-3-201ENST00000635744 85 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MIR1244-2-201ENST00000636449 85 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 MIR1244-4-202ENST00000636813 85 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AL731532.1-201ENST00000623972 4236 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 AC005183.1-201ENST00000603687 1979 ntBASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HRH3Q9Y5N1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AL391987.6-201ENST00000305671 199 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 SNORA51.1-201ENST00000363243 140 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 RNU6-48P-201ENST00000384161 107 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 RNU6-378P-201ENST00000384324 107 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 RNU6-700P-201ENST00000391043 107 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 HSPE1P8-201ENST00000406997 288 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 RPL35AP31-201ENST00000418340 337 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC092423.1-201ENST00000430165 186 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AL133445.1-201ENST00000467051 452 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC007998.1-201ENST00000474156 672 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms