Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MTND5P6-201ENST00000422338 1798 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 MIR375-201ENST00000362103 64 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 Y_RNA.19-201ENST00000362462 99 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SKP115-201ENST00000363177 317 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 RNA5SP514-201ENST00000363717 111 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 Y_RNA.555-201ENST00000384673 110 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AC016739.1-201ENST00000405359 345 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 OR3A2-201ENST00000408891 1076 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 RPS17P8-201ENST00000434525 335 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 GEMIN2P1-201ENST00000454246 752 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 RPL21P41-201ENST00000459863 264 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SL269P-201ENST00000467795 305 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 SNORA70.20-201ENST00000516848 126 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-182P-201ENST00000516970 105 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 HMGB2P1-201ENST00000591146 634 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 VN1R91P-201ENST00000594377 169 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 AL512643.1-201ENST00000635735 524 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 Z95114.1-201ENST00000624264 14574 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 EOGT-210ENST00000615922 1931 ntBASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB11Q9Y5F2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AC092747.4-201ENST00000620519 1861 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AL157777.2-201ENST00000258070 137 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 SELENOWP1-201ENST00000322792 252 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-371P-201ENST00000364283 108 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RNU4-50P-201ENST00000364361 141 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RNA5SP211-201ENST00000365516 117 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 Y_RNA.785-201ENST00000384290 109 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-817P-201ENST00000391083 104 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AL391219.1-201ENST00000422570 483 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 EI24P4-201ENST00000423683 1078 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AL132765.1-201ENST00000434165 553 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AC073063.1-201ENST00000434352 607 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-953P-201ENST00000459154 107 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AC069499.1-201ENST00000489433 509 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 IGKV2-18-201ENST00000522607 343 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AL049839.1-201ENST00000556151 657 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AC090517.1-201ENST00000569307 266 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 MIR1273E-201ENST00000581165 102 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 MIR3176-201ENST00000582210 90 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AL160281.1-201ENST00000605307 311 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-85P-201ENST00000605989 107 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 AL591516.1-201ENST00000611326 274 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RNA5SP440-201ENST00000612665 119 ntBASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB11Q9Y5F2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms