Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC032011.1-201ENST00000611703 1549 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 MIR183-201ENST00000384958 110 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 SNORD17-201ENST00000390930 237 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 RPL21P32-201ENST00000419877 477 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 PSMA6P3-201ENST00000428242 164 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 FGF7P5-201ENST00000441829 291 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 TRGVB-201ENST00000453257 471 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 ST13P14-201ENST00000474095 734 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC090453.1-201ENST00000495560 436 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 HMGB3P15-201ENST00000507326 574 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC026784.1-201ENST00000507986 352 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC109445.1-201ENST00000512356 383 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC126177.3-201ENST00000551839 688 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC090695.1-201ENST00000561269 1222 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 MIR4760-201ENST00000585040 80 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC004987.4-201ENST00000603383 338 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 BNIP3P11-201ENST00000603878 563 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AL450489.1-201ENST00000612071 468 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC243773.3-201ENST00000613270 256 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AL355810.1-201ENST00000614629 552 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AL356585.4-201ENST00000623078 1229 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AP002907.1-201ENST00000606361 1430 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 PWAR6-201ENST00000552334 4618 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 AL513302.2-201ENST00000562313 1842 ntBASIC3.26□□□□□ -1.89
ATG4BQ9Y4P1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 RNU4-35P-201ENST00000362588 141 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 MIR513B-201ENST00000385136 84 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC092447.6-201ENST00000414578 210 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC084290.1-201ENST00000434995 374 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 COX7BP2-201ENST00000437976 242 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 CR769776.1-201ENST00000441254 787 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC091153.1-201ENST00000466297 402 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC093278.1-201ENST00000494700 600 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AP001372.4-201ENST00000524889 472 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC024224.1-201ENST00000538284 609 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 MTND4P33-201ENST00000556706 766 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AL512347.1-201ENST00000566420 503 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 OR4K7P-201ENST00000580232 945 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC022662.1-201ENST00000580252 331 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 BNIP3P22-201ENST00000593399 556 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC012669.1-201ENST00000603209 283 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC080013.3-201ENST00000606839 578 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC007349.4-201ENST00000608114 532 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 RMST_8.1-201ENST00000610287 165 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC025588.4-201ENST00000615802 908 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AL353748.2-201ENST00000622148 471 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AC023510.2-201ENST00000622162 746 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 U6.105-201ENST00000637379 88 ntBASIC3.25□□□□□ -1.89
ATG4BQ9Y4P1 AL049781.1-201ENST00000623195 3585 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms