Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC009812.4-201ENST00000569134 1805 ntBASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
KCNIP3Q9Y2W7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC092435.3-201ENST00000565538 3654 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 MIR493-201ENST00000385254 89 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RNU6-1176P-201ENST00000390955 107 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL21P75-201ENST00000396599 483 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL21P28-201ENST00000401418 483 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AL592114.1-201ENST00000403842 483 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AL355143.1-201ENST00000407101 841 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RN7SKP111-201ENST00000410349 271 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RNU6-628P-201ENST00000410675 107 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RNA5SP38-201ENST00000410750 119 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL18AP17-201ENST00000455326 198 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AL359385.1-201ENST00000456509 365 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL21P39-201ENST00000463605 483 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC011979.1-201ENST00000472300 483 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL21P93-201ENST00000480465 489 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC233702.1-201ENST00000482905 502 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC087190.1-201ENST00000484462 480 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC093591.1-201ENST00000491435 481 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL21P129-201ENST00000491732 478 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 RPL21P16-201ENST00000495531 483 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 HSPD1P15-201ENST00000505573 1122 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC118282.1-201ENST00000506408 765 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 FCF1P8-201ENST00000510322 597 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 APOOP4-201ENST00000513530 597 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 SNORA31.1-201ENST00000515993 133 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 SNORA31.5-201ENST00000516190 133 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 MTND2P7-201ENST00000521337 640 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 YWHAZP1-201ENST00000556286 722 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 MIR4286-201ENST00000580651 93 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC053481.4-201ENST00000583164 216 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 DUXAP11-201ENST00000603858 526 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC009220.3-201ENST00000604318 586 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC004853.1-201ENST00000604902 698 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC097504.2-201ENST00000608088 454 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 PART1_2.1-201ENST00000612397 250 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC006111.3-201ENST00000622137 383 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AC091903.1-201ENST00000624322 454 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 LINC02211-204ENST00000642024 1070 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KCNIP3Q9Y2W7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 RNU1-32P-201ENST00000363937 159 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 Y_RNA.472-201ENST00000384322 102 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 RNU6-1122P-201ENST00000384449 107 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AL590084.1-201ENST00000407885 387 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 RNU2-43P-201ENST00000410306 190 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 MRPL50P2-201ENST00000416821 482 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 OR2AS1P-201ENST00000427827 319 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 MTCO1P53-201ENST00000441633 699 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AL121871.1-201ENST00000443413 436 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 SBDSP1-204ENST00000453858 737 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 MTCO3P11-201ENST00000455103 774 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC006499.2-201ENST00000513470 337 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC026402.1-201ENST00000513642 170 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 RNU6-583P-201ENST00000516012 92 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 RNU1-143P-201ENST00000516296 146 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC022861.1-201ENST00000522981 663 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC084824.1-201ENST00000550917 1005 ntBASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.74□□□□□ -1.97
KCNIP3Q9Y2W7 AL132657.2-201ENST00000564417 358 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms