Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNA5SP230-201ENST00000517039 122 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 RNU6-1271P-201ENST00000517049 105 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 DEFB109D-201ENST00000529497 240 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC006349.1-201ENST00000555526 235 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC138761.3-201ENST00000579993 334 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC092747.3-201ENST00000603769 301 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AC007485.1-201ENST00000616755 206 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 MIR6886-201ENST00000619864 61 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 AL669831.3-213ENST00000636676 183 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 API5P2-201ENST00000397055 1498 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 PNPT1P2-201ENST00000456768 2050 ntBASIC5.32□□□□□ -1.56
AP4E1Q9UPM8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 KPNA2P1-201ENST00000458289 1591 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC063976.2-201ENST00000425667 3556 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 SNORA63.7-201ENST00000365579 123 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 SNORA2.3-201ENST00000383920 135 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 Y_RNA.527-201ENST00000384573 102 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 U3.32-201ENST00000408116 212 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 RNU6-847P-201ENST00000411115 108 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC068533.1-201ENST00000418542 415 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 ATG3P1-201ENST00000419507 911 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 BRWD1P3-201ENST00000428816 390 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AL389915.2-201ENST00000454576 441 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AL583843.1-201ENST00000456070 346 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 SNORD121B-201ENST00000458838 81 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 U8.20-201ENST00000459445 131 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 RN7SL443P-201ENST00000464331 290 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 RN7SL222P-201ENST00000476452 299 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC010655.3-201ENST00000478818 450 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AF213884.1-201ENST00000488102 463 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 HIGD1AP14-201ENST00000507617 282 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 OR11H5P-201ENST00000554039 926 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC018552.1-201ENST00000562099 811 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 TVP23CP2-201ENST00000571473 623 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AL627230.1-201ENST00000613077 211 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AL162373.1-201ENST00000620433 407 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC138965.3-201ENST00000623875 498 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 MTND5P30-201ENST00000452896 1731 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 AC092079.1-201ENST00000558620 1985 ntBASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP4E1Q9UPM8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MTND5P28-201ENST00000438005 1594 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 RN7SKP113-201ENST00000363891 295 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 SNORD115-7-201ENST00000365306 82 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 Y_RNA.476-201ENST00000384347 108 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MIR223-201ENST00000385204 110 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 MIR323B-201ENST00000385269 82 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 EIF4E2P1-201ENST00000393781 255 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 AL136372.1-201ENST00000403060 228 ntBASIC5.3□□□□□ -1.56
AP4E1Q9UPM8 RNU2-36P-201ENST00000410361 191 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms