Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 A2MP1-204ENST00000566278 4130 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 RNU5D-1-201ENST00000363299 116 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 RNU6-660P-201ENST00000364566 109 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 RNU6-1300P-201ENST00000391046 108 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AL158156.1-201ENST00000422509 473 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC093698.1-201ENST00000423843 571 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC006011.1-201ENST00000442758 349 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC112206.1-201ENST00000468416 477 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 TRBV8-2-201ENST00000475637 270 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC010587.1-201ENST00000505809 469 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 RNU6-416P-201ENST00000516265 103 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC105029.1-201ENST00000520250 669 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC239860.2-201ENST00000525886 270 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC091178.1-203ENST00000584586 279 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC012065.4-201ENST00000602445 679 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 SNRPGP17-201ENST00000603780 214 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 AC016925.2-201ENST00000605108 242 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 PABPC1P9-201ENST00000426076 1612 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.24□□□□□ -1.41
COL17A1Q9UMD9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 RPL21P132-201ENST00000331267 462 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 RNU6-374P-201ENST00000364146 108 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 Y_RNA.510-201ENST00000384511 114 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 SNORD96B-201ENST00000386148 79 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 Z82190.1-201ENST00000454534 490 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 RPS15AP36-201ENST00000492022 382 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 SEPT14P4-201ENST00000513445 186 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 RNU6-277P-201ENST00000516272 106 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC008802.1-201ENST00000519121 791 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC008126.1-201ENST00000549019 480 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC011611.1-201ENST00000552179 197 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 HMGN2P47-201ENST00000559378 272 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 MIR548Y-201ENST00000582739 110 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC005086.4-201ENST00000623065 213 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 ZNF734P-201ENST00000419494 1534 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AC058791.1-201ENST00000608412 3198 ntBASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.23□□□□□ -1.41
COL17A1Q9UMD9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RNA5SP88-201ENST00000365560 109 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RNU6-532P-201ENST00000384318 107 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 PEX12P1-201ENST00000400284 1048 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC114482.1-201ENST00000418010 247 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL035410.1-201ENST00000427409 427 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL831737.1-201ENST00000441288 271 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC090013.1-201ENST00000485147 480 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 ARL2BPP5-201ENST00000523141 481 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC007458.1-201ENST00000542812 373 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC011712.1-201ENST00000588959 234 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms