Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC026634.1-201ENST00000634369 198 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AC139713.2-210ENST00000641741 992 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL049780.3-201ENST00000624612 1583 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AC004972.1-201ENST00000623934 2209 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 MIR217-201ENST00000384817 110 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 MIR23A-201ENST00000385245 73 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL355615.1-201ENST00000406187 641 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC099677.1-201ENST00000420575 175 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 MTND2P19-201ENST00000449129 1012 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC112492.1-201ENST00000449607 712 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 HMGB1P25-201ENST00000468402 607 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC096751.1-202ENST00000502691 1067 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 PRELID3BP6-201ENST00000503839 571 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC105914.1-201ENST00000511798 226 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL133393.1-201ENST00000603277 287 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 MTATP6P2-201ENST00000603319 678 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC084824.5-201ENST00000612009 413 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC008759.3-201ENST00000613300 508 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 AC008083.4-201ENST00000615076 444 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH9Q9ULB4 ZNF807-201ENST00000328088 1707 ntBASIC3.19□□□□□ -1.9
CDH9Q9ULB4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AL591034.1-201ENST00000407447 340 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 BOLA3P4-201ENST00000418151 400 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 RPL7P46-201ENST00000425129 740 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 Z93242.1-201ENST00000427102 353 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 MTCO1P48-201ENST00000448024 1096 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC093392.2-201ENST00000450682 337 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 OR4P1P-201ENST00000530808 1136 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 CYB5AP5-201ENST00000549779 389 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 EEF1B2P4-201ENST00000551398 348 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AP001029.3-201ENST00000588063 596 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AC090330.1-201ENST00000588646 764 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AL355810.1-201ENST00000614629 552 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH9Q9ULB4 GDI2P1-201ENST00000429312 1336 ntBASIC3.18□□□□□ -1.9
CDH9Q9ULB4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 U3.6-201ENST00000363622 211 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 RPL17P50-201ENST00000396131 546 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC092634.6-201ENST00000418558 192 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 TRIM60P18-201ENST00000441518 828 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 HSPE1P28-201ENST00000443139 211 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH9Q9ULB4 RPL21P8-201ENST00000465083 535 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 RPS3AP14-201ENST00000483907 780 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC080014.1-201ENST00000496877 1201 ntBASIC3.17□□□□□ -1.9
CDH9Q9ULB4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms