Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC012443.1-201ENST00000605605 231 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC006329.2-201ENST00000611491 394 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AC090971.5-201ENST00000621102 293 ntBASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP3Q9UKI2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC073136.1-201ENST00000449426 2884 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 OR4F13P-202ENST00000560066 2054 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-61P-201ENST00000365528 109 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RNA5SP87-201ENST00000384155 118 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.579-201ENST00000390939 94 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 HSPA8P15-201ENST00000401676 786 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 MIR548P-201ENST00000408336 84 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-516P-201ENST00000411381 104 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 BX323014.1-201ENST00000412876 237 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RPS3AP52-201ENST00000435639 297 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 PRPS1P1-201ENST00000445305 876 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 PPIAP3-201ENST00000450588 505 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 SNRPFP3-201ENST00000457792 225 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AL162395.1-201ENST00000457882 422 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 MTND4P17-201ENST00000470444 350 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AL049874.2-201ENST00000492636 288 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1170P-201ENST00000515974 106 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RN7SKP260-201ENST00000516907 149 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC100870.1-201ENST00000522035 505 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC109635.4-202ENST00000531666 412 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 FRG2DP-202ENST00000566967 323 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 BNIP3P25-201ENST00000596023 559 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AP000942.4-201ENST00000604811 241 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC087783.2-201ENST00000605070 562 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC093799.2-201ENST00000610062 578 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 uc_338.15-201ENST00000615470 191 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 uc_338.34-201ENST00000617467 174 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AC073869.10-201ENST00000642016 354 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 PABPC1P7-201ENST00000413177 1513 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 LARP1BP1-201ENST00000506036 1359 ntBASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDC42EP3Q9UKI2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AL121886.1-201ENST00000358609 435 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 RN7SKP104-201ENST00000362605 328 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-474P-201ENST00000384243 107 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 SNORA24.1-201ENST00000384401 135 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 SNORD116-29-201ENST00000384516 83 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MIR105-1-201ENST00000385222 81 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 VN1R36P-201ENST00000414936 291 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 MTCO2P27-201ENST00000420740 428 ntBASIC4.38□□□□□ -1.71
CDC42EP3Q9UKI2 DDX39BP1-205ENST00000422507 192 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms