Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RPS3AP9-201ENST00000417027 792 ntBASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 RPL21P18-201ENST00000469899 480 ntBASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 AC147055.1-201ENST00000509261 750 ntBASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-943P-201ENST00000516960 98 ntBASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 MTND5P35-201ENST00000557537 1720 ntBASIC3.38□□□□□ -1.87
RIMBP3Q9UFD9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 Y_RNA.178-201ENST00000363832 102 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 SNORA25.6-201ENST00000364121 118 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AL627390.1-201ENST00000396055 340 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 FABP5P13-201ENST00000452144 328 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 VTA1P2-201ENST00000520205 911 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 CD24P2-201ENST00000565486 219 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AC012119.1-201ENST00000603184 222 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AC067838.1-201ENST00000606064 577 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AC012360.2-201ENST00000609349 391 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AL359740.1-201ENST00000624340 592 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AGGF1P8-201ENST00000562979 1000 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 AP006248.2-201ENST00000623309 592 ntBASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RIMBP3Q9UFD9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AC011978.2-201ENST00000569835 2054 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 PHKBP1-201ENST00000450951 1951 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-1-201ENST00000383898 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-42P-201ENST00000384165 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-36P-201ENST00000384172 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-4P-201ENST00000384205 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-5P-201ENST00000384238 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-3P-201ENST00000384314 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-2-201ENST00000384627 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-9-201ENST00000384776 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-33P-201ENST00000384793 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AL589994.1-201ENST00000404962 340 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AC009302.1-201ENST00000417147 390 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 HMGB3P10-201ENST00000434734 572 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 YWHAZP7-201ENST00000436906 631 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 HSPE1P22-201ENST00000456856 327 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AC090543.1-201ENST00000492168 485 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNA5SP76-201ENST00000516277 87 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 OR7K1P-201ENST00000546439 926 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 SNORD39.2-201ENST00000579995 76 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 RNU6-6P-201ENST00000606623 107 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 AC008568.2-201ENST00000623862 2313 ntBASIC3.36□□□□□ -1.87
RIMBP3Q9UFD9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 RPS24P8-201ENST00000431490 402 ntBASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 RPL21P134-201ENST00000453468 483 ntBASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 SNRPFP4-201ENST00000456366 242 ntBASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 MTND2P17-201ENST00000550281 688 ntBASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 AC022709.1-201ENST00000615967 87 ntBASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 MIR6132-201ENST00000622083 109 ntBASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 AC093536.2-201ENST00000565257 1406 ntBASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.35□□□□□ -1.87
RIMBP3Q9UFD9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 AL138787.1-202ENST00000437804 898 ntBASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 AC090819.1-201ENST00000523800 1111 ntBASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 AC025260.1-201ENST00000548858 430 ntBASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 CU459211.1-201ENST00000635667 749 ntBASIC3.34□□□□□ -1.87
RIMBP3Q9UFD9 ZNF542P-204ENST00000482727 1305 ntBASIC3.34□□□□□ -1.88
RIMBP3Q9UFD9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 RPL5P19-201ENST00000404228 893 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 RNA5SP129-201ENST00000410276 118 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AC004965.1-201ENST00000413033 213 ntBASIC3.33□□□□□ -1.88
RIMBP3Q9UFD9 AC009237.2-201ENST00000421358 284 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms