Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 MTCO3P28-201ENST00000513351 515 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 MTCYBP43-201ENST00000513621 740 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC005798.1-201ENST00000513715 387 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC087276.1-201ENST00000529659 480 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 ACTR3BP3-201ENST00000565577 979 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC012435.1-202ENST00000568772 240 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC010680.4-201ENST00000605334 543 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC092354.2-201ENST00000607786 514 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC091953.5-201ENST00000622919 233 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC119674.1-207ENST00000641355 633 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 PABPC1P7-201ENST00000413177 1513 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 MTCO1P23-201ENST00000415223 1526 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC6Q9UBN7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 CR381670.1-201ENST00000624291 1693 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 USP8P1-201ENST00000494673 3183 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 SNORD6-201ENST00000365444 73 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 RNU6-723P-201ENST00000383973 107 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 RNU6-878P-201ENST00000384578 110 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC016769.3-201ENST00000396562 315 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 ARF4P3-201ENST00000397387 509 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 RPS3AP26-201ENST00000398259 784 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 RHEBP3-201ENST00000411920 351 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 MORF4L1P6-201ENST00000418771 268 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 FNDC3CP-201ENST00000420795 1155 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC092832.1-201ENST00000422934 400 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 PAXBP1P1-201ENST00000449315 447 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC082651.2-201ENST00000496833 166 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC093809.1-201ENST00000509155 340 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 RNU6-150P-201ENST00000516237 95 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC006960.3-201ENST00000561845 705 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AL133457.1-201ENST00000564251 987 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 MTCYBP33-201ENST00000575007 1130 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 MAGOH2P-202ENST00000584384 429 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 MTCYBP22-201ENST00000603788 447 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AL034351.1-201ENST00000605288 668 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC092354.1-201ENST00000606057 376 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AC025588.4-201ENST00000615802 908 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 ZNF734P-201ENST00000419494 1534 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AP002907.1-201ENST00000606361 1430 ntBASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
HDAC6Q9UBN7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 MFSD8-236ENST00000641509 4050 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 SNORA70E-201ENST00000384492 135 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 MIR124-3-201ENST00000384866 87 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 AC245052.5-201ENST00000416320 649 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 AC012065.2-201ENST00000421295 375 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 BX119904.4-201ENST00000424402 301 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 AP000907.1-201ENST00000428428 510 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 OR51AB1P-201ENST00000429046 620 ntBASIC4.18□□□□□ -1.74
HDAC6Q9UBN7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms