Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IGLVIV-53-201ENST00000520107 367 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC093249.4-201ENST00000564755 259 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 MIR4480-201ENST00000582492 71 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 HMGB2P1-201ENST00000591146 634 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC004908.2-201ENST00000609090 574 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC064836.2-201ENST00000609491 462 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC091953.3-201ENST00000623220 236 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AP001784.1-201ENST00000624107 428 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AC112487.2-201ENST00000637950 304 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 AL672167.1-203ENST00000641299 2975 ntBASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PPARGC1AQ9UBK2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 MIR1-2-201ENST00000384961 85 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 RNU6-1068P-201ENST00000410958 103 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 MTCO3P46-201ENST00000425787 232 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AL360081.1-201ENST00000428299 555 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 RPS20P5-201ENST00000434808 360 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC005154.2-201ENST00000438110 379 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 HSPD1P15-201ENST00000505573 1122 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC091868.1-201ENST00000508746 304 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 OR5B19P-201ENST00000531766 928 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC068831.4-201ENST00000556118 109 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 RPL21P12-201ENST00000559810 515 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC037471.2-201ENST00000564941 598 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 COX6CP3-201ENST00000580869 223 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AL355812.1-201ENST00000603215 216 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC105429.2-201ENST00000610567 517 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC233309.1-201ENST00000619522 751 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC002550.2-201ENST00000621246 394 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 ZNF734P-201ENST00000419494 1534 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 AC092435.4-201ENST00000623012 4159 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 NXPH1-205ENST00000602349 1953 ntBASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PPARGC1AQ9UBK2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 AL139811.1-201ENST00000424779 2299 ntBASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 AL442639.1-201ENST00000625030 1899 ntBASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 AL359922.3-201ENST00000624779 1670 ntBASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 LINC01109-201ENST00000603837 3081 ntBASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PPARGC1AQ9UBK2 OR1S2-201ENST00000302592 978 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 U3.11-201ENST00000364476 212 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 SNORA51.2-201ENST00000364595 132 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 RNU4-48P-201ENST00000365559 182 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 Y_RNA.381-201ENST00000365666 102 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 Y_RNA.460-201ENST00000384255 102 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 MIR19A-201ENST00000384878 82 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 U3.29-201ENST00000391296 212 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AL590762.2-201ENST00000395798 571 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 RN7SKP32-201ENST00000410167 303 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 HMGN1P24-201ENST00000412282 298 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 E2F6P2-201ENST00000420708 748 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms