Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COMMD3Q9UBI1 HMGB3P2-201ENST00000411913 584 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 AL024507.1-201ENST00000412741 274 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 MTATP6P11-201ENST00000428071 670 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 MTCO1P45-201ENST00000431457 267 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COMMD3Q9UBI1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 AL137843.1-201ENST00000605078 385 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 AC012557.1-201ENST00000607115 611 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 AL159169.3-201ENST00000608871 561 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 AC112503.2-201ENST00000609005 552 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 AL359893.1-201ENST00000447628 1580 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2□□□□□ -2.09
COMMD3Q9UBI1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 RNU6-859P-201ENST00000362728 107 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 RNU6-31P-201ENST00000384388 108 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 MIR670-201ENST00000390142 98 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AL139039.1-201ENST00000401900 692 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 SFR1P1-201ENST00000403720 688 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AL591416.1-201ENST00000404015 867 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 COTL1P1-201ENST00000422309 375 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AL392003.1-201ENST00000434394 243 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 BX510359.1-201ENST00000456973 237 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC109486.1-201ENST00000486833 374 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC004062.1-201ENST00000509926 645 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 RNA5SP320-201ENST00000516263 124 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 GLUD1P4-201ENST00000590914 418 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC009570.1-201ENST00000609599 745 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AL138880.2-201ENST00000616214 239 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 MIR6076-201ENST00000617521 113 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 MIR6075-201ENST00000620782 95 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 MIR1291-201ENST00000627649 87 ntBASIC1.99□□□□□ -2.09
COMMD3Q9UBI1 AL512646.1-201ENST00000269395 1077 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 SNORA71.3-201ENST00000362582 128 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AL359511.1-201ENST00000402970 211 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AC092017.2-201ENST00000427600 362 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 PGBD4P3-201ENST00000440731 581 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AP000936.2-201ENST00000447151 681 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AL031183.1-201ENST00000457667 207 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AC114322.1-201ENST00000506771 926 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 SNORD53-201ENST00000579969 78 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AC005412.1-201ENST00000580812 1049 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AC013562.2-201ENST00000611632 603 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 MIR6766-201ENST00000622641 72 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 MTND4P1-201ENST00000457501 1466 ntBASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COMMD3Q9UBI1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 RNU1-85P-201ENST00000364127 164 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 RNU6-452P-201ENST00000384406 107 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 RNA5SP252-201ENST00000391131 119 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AL137014.1-201ENST00000420490 1226 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC092427.1-202ENST00000430569 476 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AL513321.1-201ENST00000441175 761 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 RNA5SP310-201ENST00000459084 116 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 RPL7P49-201ENST00000471402 708 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC004263.1-201ENST00000479327 332 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC090096.1-201ENST00000489168 390 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC034159.1-201ENST00000513885 583 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC067904.2-201ENST00000517322 1283 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC008562.1-201ENST00000521763 330 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC093014.1-201ENST00000548926 724 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 U73023.1-201ENST00000603134 700 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms