Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 AP005019.3-201ENST00000620418 560 ntBASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 AC099654.10-201ENST00000640395 161 ntBASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.18□□□□□ -1.74
SH3BP4Q9P0V3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-181P-201ENST00000363225 107 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 Y_RNA.159-201ENST00000363674 87 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-282P-201ENST00000365357 103 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-744P-201ENST00000365557 107 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL133412.1-201ENST00000380194 2992 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-483P-201ENST00000384088 108 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL023807.1-201ENST00000407932 359 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AMD1P2-201ENST00000412936 992 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 UQCRBP1-201ENST00000421129 336 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL353193.1-201ENST00000421444 268 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RPL7AP25-201ENST00000423357 805 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 USP9YP9-201ENST00000429406 715 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC006466.1-201ENST00000438721 289 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 FAM103A2P-201ENST00000444122 354 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL645939.1-201ENST00000453429 797 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC099563.1-201ENST00000456086 418 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RPL23AP2-201ENST00000471227 466 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AP000852.1-201ENST00000472460 573 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC015795.1-201ENST00000513669 327 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-875P-201ENST00000516488 106 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU4-60P-201ENST00000517239 135 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RAB11AP2-201ENST00000545905 639 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC009101.1-201ENST00000568135 242 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RN7SL690P-201ENST00000582087 240 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC007363.1-201ENST00000604736 620 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL035413.2-201ENST00000604801 525 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL158211.4-201ENST00000606988 584 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-87P-201ENST00000607561 108 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC004009.2-201ENST00000623016 728 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AP003122.6-201ENST00000623831 495 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AC099654.5-201ENST00000636479 350 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 AL049780.3-201ENST00000624612 1583 ntBASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SH3BP4Q9P0V3 MTND5P3-201ENST00000438536 1800 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 Y_RNA.61-201ENST00000362835 102 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 RNU4-1-201ENST00000363925 141 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 RHOT1P2-201ENST00000366423 333 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 SNORA70F-201ENST00000384142 135 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 RNU6-876P-201ENST00000391295 104 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AL031679.1-201ENST00000400616 525 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 RNA5SP104-201ENST00000410989 118 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AC078974.1-201ENST00000411597 223 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AC245054.1-201ENST00000420944 258 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AC012498.1-201ENST00000424037 437 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AL353777.1-201ENST00000425552 326 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AL359265.2-201ENST00000434367 631 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AC002486.1-201ENST00000435098 391 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AC104850.1-201ENST00000435940 476 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 ARPC3P1-201ENST00000437218 533 ntBASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.16□□□□□ -1.74
SH3BP4Q9P0V3 AL590399.6-201ENST00000446396 307 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms