Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 AL157700.1-201ENST00000561973 1432 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 OR4G1P-203ENST00000641984 1631 ntBASIC4.54□□□□□ -1.68
KCMF1Q9P0J7 MTND4P23-201ENST00000447723 1363 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 RNU6-1078P-201ENST00000364522 103 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 XGY1-201ENST00000381172 446 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 RNU6-116P-201ENST00000384042 109 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 Y_RNA.493-201ENST00000384422 102 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 MIR558-201ENST00000384920 94 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 SNORD37.1-201ENST00000390968 65 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AL356432.1-201ENST00000405809 419 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 U3.35-201ENST00000408405 208 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 RNU2-47P-201ENST00000410649 186 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 EEF1A1P40-201ENST00000412883 573 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 RPL7P12-201ENST00000446719 750 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 SCARNA22-201ENST00000503991 125 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 OR7H2P-201ENST00000513483 306 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 SNORD27.1-201ENST00000516319 72 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC022690.1-201ENST00000526681 550 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC107918.3-201ENST00000533272 382 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 OR8L1P-201ENST00000534005 955 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC068831.4-201ENST00000556118 109 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC087477.6-201ENST00000559595 843 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 MIR3667-201ENST00000581025 74 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 MIR4737-201ENST00000583979 81 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 FAM27B-201ENST00000610601 213 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 AL136313.1-201ENST00000624804 202 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 MIR4496-201ENST00000635896 61 ntBASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KCMF1Q9P0J7 MAPK10-263ENST00000641052 4307 ntBASIC4.53□□□□□ -1.69
KCMF1Q9P0J7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 ASNSP1-201ENST00000518311 1939 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 DHX9P1-201ENST00000436565 3076 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 SNORA32.2-201ENST00000384049 122 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 RPL32P23-201ENST00000397237 405 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 ARL4AP5-201ENST00000404372 599 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 OR1AA1P-201ENST00000419597 916 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 E2F6P2-201ENST00000420708 748 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 RPL35AP12-201ENST00000425362 338 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AL138785.1-201ENST00000425821 331 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 NRBF2P3-201ENST00000432731 865 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 RPS17P13-201ENST00000448974 407 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC073415.1-201ENST00000449240 153 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 MTND1P9-201ENST00000453775 944 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 ST13P14-201ENST00000474095 734 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 RNU6-1153P-201ENST00000516760 105 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 HMGB1P19-201ENST00000517578 577 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 BTF3P12-201ENST00000519620 469 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 HMGB1P41-201ENST00000520234 440 ntBASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.52□□□□□ -1.69
KCMF1Q9P0J7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms