Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC090502.2-201ENST00000549267 280 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AP005205.1-201ENST00000563503 508 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC053481.3-201ENST00000577881 843 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC090330.1-201ENST00000588646 764 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 MIR6076-201ENST00000617521 113 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLN6Q9NWW5 AL035425.3-201ENST00000564206 4996 ntBASIC2.7□□□□□ -1.98
CLN6Q9NWW5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 RNU6-492P-201ENST00000363035 104 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 RNU5D-1-201ENST00000363299 116 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 RNU6-1066P-201ENST00000363573 105 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 MIR217-201ENST00000384817 110 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 RPS4XP3-201ENST00000398541 413 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AL035405.1-201ENST00000400795 710 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 MIR887-201ENST00000401258 79 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AL357075.1-201ENST00000404107 726 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AL590004.2-201ENST00000404787 371 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 RAC1P8-201ENST00000427086 527 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 MTATP6P11-201ENST00000428071 670 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AL512637.2-201ENST00000431287 1256 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC092393.1-201ENST00000439625 742 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 DYNLL1P6-201ENST00000503440 264 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 PRELID3BP5-201ENST00000508612 460 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC010625.1-201ENST00000511296 403 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 FAM60DP-201ENST00000524174 632 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AP003168.1-201ENST00000530091 307 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC044913.1-201ENST00000557200 430 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 NCAPGP2-201ENST00000557911 754 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 MED28P6-201ENST00000558776 231 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC093227.2-201ENST00000589357 285 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC090115.4-201ENST00000609970 188 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC231759.1-201ENST00000616455 597 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 MIR6810-201ENST00000622701 70 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AP003122.6-201ENST00000623831 495 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC009039.2-201ENST00000624524 529 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AP000676.4-201ENST00000624659 623 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 AC080188.3-201ENST00000624842 748 ntBASIC2.69□□□□□ -1.98
CLN6Q9NWW5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC073325.2-201ENST00000339545 159 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 MIR493-201ENST00000385254 89 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AL355615.1-201ENST00000406187 641 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AL137014.1-201ENST00000420490 1226 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 Z93242.1-201ENST00000427102 353 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC004866.2-201ENST00000438285 481 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 PDSS1P2-201ENST00000449397 678 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 RN7SL863P-201ENST00000462370 296 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC008155.2-201ENST00000464337 397 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC020898.1-201ENST00000474167 787 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 RPS26P21-201ENST00000475397 348 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC006499.5-201ENST00000505037 514 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 snoZ278.1-201ENST00000517059 112 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AP000857.1-201ENST00000532151 543 ntBASIC2.68□□□□□ -1.98
CLN6Q9NWW5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.68□□□□□ -1.98
CLN6Q9NWW5 CYB5AP5-201ENST00000549779 389 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms