Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 MIR4275-201ENST00000636486 87 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC092447.10-201ENST00000620607 1652 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC090740.1-201ENST00000623193 2262 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC118273.1-201ENST00000525324 3006 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 RNU1-64P-201ENST00000365443 163 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 PTMAP5-201ENST00000393073 333 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC025750.1-201ENST00000399891 379 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AL591034.1-201ENST00000407447 340 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 RN7SKP53-201ENST00000411337 315 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 XKRYP1-201ENST00000423438 492 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC006989.1-201ENST00000427212 131 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AL035407.1-201ENST00000429211 571 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 TXNL1P1-201ENST00000429528 554 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 XKRYP2-201ENST00000432915 492 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 RPS29P31-201ENST00000446147 164 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 RPS3AP46-201ENST00000448352 682 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC007967.1-201ENST00000455422 1159 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 SNORD121B-201ENST00000458838 81 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 NIPA2P2-201ENST00000496376 1083 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC017037.2-201ENST00000513850 890 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 RNU6-528P-201ENST00000516926 100 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC020914.6-201ENST00000594327 272 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AL133507.1-201ENST00000605269 557 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AC012442.3-202ENST00000636742 206 ntBASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BLOC1S4Q9NUP1 AL513185.3-201ENST00000433335 1300 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 DEFB108F-201ENST00000344638 222 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 SNORA5A-201ENST00000384111 134 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 MIR134-201ENST00000385258 73 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 MIR320C1-201ENST00000408566 88 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 MIR1290-201ENST00000408735 78 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 RN7SKP202-201ENST00000410439 330 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 MTND1P31-201ENST00000449206 961 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC017015.1-201ENST00000477387 286 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 DEFB108D-201ENST00000527787 222 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 UBTFL10-201ENST00000528532 562 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 OR4K8P-201ENST00000578842 1048 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AL031281.1-201ENST00000604049 488 ntBASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.98□□□□□ -1.77
BLOC1S4Q9NUP1 AL031985.3-201ENST00000565390 2449 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms