Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC021087.2-201ENST00000504656 1203 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 MIR151B-201ENST00000584249 96 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 AL512598.1-201ENST00000610158 273 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2□□□□□ -2.09
CHD8Q9HCK8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
CHD8Q9HCK8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2□□□□□ -2.09
CHD8Q9HCK8 AC025263.3-201ENST00000622965 1396 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CHD8Q9HCK8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CHD8Q9HCK8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 RN7SKP123-201ENST00000410732 291 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2□□□□□ -2.09
CHD8Q9HCK8 USP9YP33-201ENST00000412220 421 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 FTH1P12-201ENST00000432137 551 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2□□□□□ -2.09
CHD8Q9HCK8 USP9YP35-201ENST00000435696 412 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 AC011352.3-201ENST00000505162 593 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2□□□□□ -2.09
CHD8Q9HCK8 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 MIR2114-201ENST00000516645 80 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 RNA5SP380-201ENST00000517190 98 ntBASIC2□□□□□ -2.09
CHD8Q9HCK8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2□□□□□ -2.09
CHD8Q9HCK8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 MIR423-201ENST00000362201 94 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 RNU6-35P-201ENST00000384530 107 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 RPL21P3-201ENST00000395517 478 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AL353597.2-202ENST00000434901 373 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AC009237.8-201ENST00000445492 379 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 MIR3683-201ENST00000580847 82 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AC000123.3-201ENST00000624029 4975 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 RNU6-316P-201ENST00000391027 107 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 LAP3P1-201ENST00000403648 294 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AC233279.1-201ENST00000455300 423 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AC011979.1-201ENST00000472300 483 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 OR4A45P-201ENST00000529954 901 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 NIFKP8-201ENST00000560500 874 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 OR4G1P-201ENST00000588632 938 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.99□□□□□ -2.09
CHD8Q9HCK8 AL451074.6-201ENST00000608512 729 ntBASIC1.99□□□□□ -2.09
CHD8Q9HCK8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AC007342.9-201ENST00000623877 1385 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 RNU1-100P-201ENST00000365255 165 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AL118520.1-201ENST00000450770 291 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AL121877.1-201ENST00000453704 622 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 RMST_9.1-201ENST00000619945 193 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AC008133.2-201ENST00000624540 351 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 ZNF542P-204ENST00000482727 1305 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AC126182.1-201ENST00000478134 357 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 LINC00888-204ENST00000487386 421 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 RNA5SP200-201ENST00000516360 103 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AC123904.3-201ENST00000547218 814 ntBASIC1.98□□□□□ -2.09
CHD8Q9HCK8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHD8Q9HCK8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CHD8Q9HCK8 AL139811.1-201ENST00000424779 2299 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 RNA5SP139-201ENST00000364340 117 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CHD8Q9HCK8 RNA5SP121-201ENST00000516537 101 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.97□□□□□ -2.09
CHD8Q9HCK8 AC121761.2-201ENST00000617300 689 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 Z99129.2-201ENST00000619967 314 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 MTND5P19-201ENST00000424872 1794 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.97□□□□□ -2.09
CHD8Q9HCK8 SRIP3-201ENST00000413200 219 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 AC017078.1-201ENST00000416146 368 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 GAPDHP27-201ENST00000447427 1020 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 FABP5P13-201ENST00000452144 328 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 AC090281.1-201ENST00000523019 276 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 HMGN2P47-201ENST00000559378 272 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 AC091953.2-201ENST00000623979 160 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 SPATA2P1-201ENST00000431223 2055 ntBASIC1.97□□□□□ -2.09
CHD8Q9HCK8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CHD8Q9HCK8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC008264.2-201ENST00000610193 3731 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms