Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 TMED11P-201ENST00000479478 690 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC026402.1-201ENST00000513642 170 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC093853.1-201ENST00000515689 483 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 PTP4A1P6-201ENST00000531034 478 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 PCMTD1P2-201ENST00000565017 355 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 MIR5186-201ENST00000577504 120 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 MIR4738-201ENST00000579134 87 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC008507.1-201ENST00000587506 734 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 BNIP3P23-201ENST00000599655 511 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC007687.1-201ENST00000602704 304 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC025588.3-201ENST00000604182 274 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AL451086.1-201ENST00000605596 223 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 FAM157B-203ENST00000639350 358 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC130650.2-201ENST00000618736 2403 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PCDH9Q9HC56 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.81□□□□□ -1.8
PCDH9Q9HC56 AC024560.2-201ENST00000507981 1497 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AL022578.1-201ENST00000439330 1433 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RNU6-623P-201ENST00000363143 105 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 Y_RNA.194-201ENST00000363985 102 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RNU6-777P-201ENST00000364265 104 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RNU4-75P-201ENST00000364621 146 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AL356967.1-201ENST00000406305 431 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC109780.2-201ENST00000413467 845 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC006989.1-201ENST00000427212 131 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AL365184.2-201ENST00000431139 435 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AL353706.1-201ENST00000436728 494 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 COX6CP2-201ENST00000444980 225 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RNU6-956P-201ENST00000458868 103 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC093767.1-201ENST00000504523 156 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 MTND3P5-201ENST00000512798 333 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RNA5SP216-201ENST00000516111 123 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RNU2-58P-201ENST00000516403 183 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 RN7SKP277-201ENST00000516895 283 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC092470.1-201ENST00000546187 132 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 HSPE1P3-201ENST00000559254 309 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 BNIP3P5-201ENST00000562290 498 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC106785.1-201ENST00000565935 262 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC012414.6-201ENST00000568241 401 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC136618.2-201ENST00000575091 400 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AP001004.1-201ENST00000582468 324 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC012557.2-201ENST00000605919 418 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AL139286.2-201ENST00000606838 396 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC103710.3-201ENST00000608157 948 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC012360.2-201ENST00000609349 391 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AC105429.2-201ENST00000610567 517 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 AL732372.2-225ENST00000642124 456 ntBASIC3.8□□□□□ -1.8
PCDH9Q9HC56 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PCDH9Q9HC56 HSPA8P1-201ENST00000425843 1833 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL122126.1-201ENST00000546905 1318 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 SNORD116-4-201ENST00000384733 96 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 RNY3P10-201ENST00000384764 102 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 RNU6-952P-201ENST00000391164 108 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AC025750.1-201ENST00000399891 379 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL024474.1-201ENST00000404655 591 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL355379.1-201ENST00000405542 640 ntBASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PCDH9Q9HC56 ZNF885P-201ENST00000420174 1098 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms