Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ZNF285B-201ENST00000561698 1767 ntBASIC3.86□□□□□ -1.79
POLR1BQ9H9Y6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
POLR1BQ9H9Y6 AC024560.2-201ENST00000507981 1497 ntBASIC3.86□□□□□ -1.79
POLR1BQ9H9Y6 AC095050.2-201ENST00000510748 1458 ntBASIC3.86□□□□□ -1.79
POLR1BQ9H9Y6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RNU1-18P-201ENST00000363062 164 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-289P-201ENST00000364093 107 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 Y_RNA.234-201ENST00000364409 97 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 SNORA9-201ENST00000384215 133 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AL138880.1-201ENST00000405824 642 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC092447.6-201ENST00000414578 210 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 USP9YP26-201ENST00000421008 661 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 Z99497.1-201ENST00000421282 135 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AL512649.1-201ENST00000428997 581 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC091286.1-201ENST00000431233 461 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 NPM1P49-201ENST00000448027 714 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC097262.1-201ENST00000452559 548 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RPL36AP13-201ENST00000457490 317 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RN7SL93P-201ENST00000463035 293 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC017015.1-201ENST00000477387 286 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RNU1-95P-201ENST00000516357 160 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RNU2-58P-201ENST00000516403 183 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 RNU1-128P-201ENST00000516704 160 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC091516.1-201ENST00000549191 703 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AC110741.2-201ENST00000605278 268 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 MIR7844-201ENST00000616161 122 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 FP236240.3-201ENST00000623061 327 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 AL445523.1-201ENST00000451184 1362 ntBASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
POLR1BQ9H9Y6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-777P-201ENST00000364265 104 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-744P-201ENST00000365557 107 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 SNORA5A-201ENST00000384111 134 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-1316P-201ENST00000384242 108 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MIR34B-201ENST00000385076 84 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MIR607-201ENST00000385241 96 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 HMGN2P8-201ENST00000391458 268 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AL031577.2-201ENST00000404133 280 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MTCO1P17-201ENST00000411522 491 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 HMGB1P11-201ENST00000413899 637 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AL137014.1-201ENST00000420490 1226 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC096638.2-201ENST00000434965 711 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MTCYBP45-201ENST00000435243 565 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 TBCAP1-201ENST00000436520 327 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AL445567.1-201ENST00000439121 144 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 RPS24P6-201ENST00000452670 400 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC034222.1-201ENST00000494052 532 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC093278.1-201ENST00000494700 600 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC021678.1-201ENST00000505195 936 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 HMGB1P22-201ENST00000505315 124 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC110768.1-201ENST00000509222 400 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-714P-201ENST00000516963 103 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 CR383656.7-201ENST00000548164 174 ntBASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.84□□□□□ -1.79
POLR1BQ9H9Y6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms