Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RN7SL826P-201ENST00000479724 288 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RN7SL244P-201ENST00000493405 297 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 HMGB3P16-201ENST00000508037 287 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC093303.1-201ENST00000514549 295 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RN7SKP66-201ENST00000516681 231 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RN7SKP147-201ENST00000517154 244 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AP001804.3-201ENST00000525146 880 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AP000859.1-201ENST00000525536 307 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AP005435.4-201ENST00000529514 284 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 APOOP3-201ENST00000536787 586 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AL163153.1-201ENST00000554223 283 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC090615.1-201ENST00000577519 154 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 MIR4691-201ENST00000583764 85 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC006006.1-201ENST00000603082 144 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 PSMA6P4-201ENST00000603247 718 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 RPL23AP92-201ENST00000603609 255 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 DPPA3P3-201ENST00000603842 430 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC113194.1-201ENST00000606037 500 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC245517.5-201ENST00000611529 162 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AL158196.1-201ENST00000616786 434 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AC244517.12-201ENST00000623581 663 ntBASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A2Q9H9S3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 RNA5SP258-201ENST00000362750 119 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-1252P-201ENST00000363054 104 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 SNORA74A-201ENST00000364089 198 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-641P-201ENST00000384006 107 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 MIR558-201ENST00000384920 94 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AL359634.1-202ENST00000404721 284 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 RNU2-39P-201ENST00000410604 198 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 COX6CP15-201ENST00000426313 211 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 RPL35AP21-201ENST00000437667 333 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 RPL32P28-201ENST00000443577 397 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AL354714.3-201ENST00000447284 493 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC022431.1-201ENST00000450941 438 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 snoU13.20-201ENST00000459180 104 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC097484.1-201ENST00000471148 389 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 MTCO1P29-201ENST00000496868 288 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC011447.4-201ENST00000587562 111 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC103710.2-201ENST00000609912 942 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC093799.2-201ENST00000610062 578 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC037198.3-201ENST00000616754 526 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AP001350.1-201ENST00000601906 1524 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 AC004972.1-201ENST00000623934 2209 ntBASIC4.44□□□□□ -1.7
SEC61A2Q9H9S3 MTND4P1-201ENST00000457501 1466 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 Y_RNA.339-201ENST00000365325 102 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 Y_RNA.414-201ENST00000384011 101 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-196P-201ENST00000384315 107 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 SNORA77-201ENST00000408716 125 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-370P-201ENST00000411008 104 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 RN7SKP247-201ENST00000411094 308 ntBASIC4.43□□□□□ -1.7
SEC61A2Q9H9S3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms