Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC034222.1-201ENST00000494052 532 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 ENPP7P9-201ENST00000514456 627 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RNU6-1314P-201ENST00000517139 104 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC107934.1-201ENST00000522215 217 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 OR4R1P-201ENST00000529879 463 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 HMGB1P6-201ENST00000569046 646 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC008638.3-201ENST00000603341 463 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 MIR6810-201ENST00000622701 70 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 CR381572.1-201ENST00000625098 102 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AL592437.2-201ENST00000421655 2434 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 RNU1-130P-201ENST00000363930 160 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 RNY1P12-201ENST00000364251 105 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 Y_RNA.259-201ENST00000364619 101 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 SNORA70F-201ENST00000384142 135 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC016397.1-201ENST00000412463 242 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 GPR143P-201ENST00000434155 205 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC016831.4-201ENST00000438302 307 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 MTND3P2-201ENST00000438452 342 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AL138799.3-201ENST00000438968 350 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC245028.2-201ENST00000458673 253 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 PLGLA-201ENST00000465668 449 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 RN7SL860P-201ENST00000473738 223 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC078785.3-201ENST00000476607 425 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC093767.1-201ENST00000504523 156 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 Y_RNA.719-201ENST00000517156 106 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 RNU6-709P-201ENST00000517257 104 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AL355802.3-201ENST00000607571 545 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 CYP3A51P-201ENST00000633513 256 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 MIR4496-201ENST00000635896 61 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AL442639.1-201ENST00000625030 1899 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 AC126323.6-202ENST00000568092 3511 ntBASIC4.98□□□□□ -1.61
RNF38Q9H0F5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF38Q9H0F5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 SNORA4.3-201ENST00000365564 137 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 RNU6-474P-201ENST00000384243 107 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 RNU6-1160P-201ENST00000384546 104 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 RNU1-82P-201ENST00000390851 165 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AL136116.1-201ENST00000403591 381 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AL359643.1-201ENST00000404109 423 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AL356967.1-201ENST00000406305 431 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 CYCSP10-201ENST00000417973 294 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 NCOR1P3-201ENST00000420479 303 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 UQCRBP1-201ENST00000421129 336 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 DUTP6-201ENST00000425573 462 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC068287.1-201ENST00000430283 295 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC092162.1-201ENST00000432828 434 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.97□□□□□ -1.61
RNF38Q9H0F5 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 AL356981.1-201ENST00000454879 684 ntBASIC4.97□□□□□ -1.61
RNF38Q9H0F5 PPP1R2P5-201ENST00000457256 603 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms