Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXP3Q9BZS1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 OR1S2-201ENST00000302592 978 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 MIR369-201ENST00000362155 70 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 RNU6-97P-201ENST00000363387 104 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.144-201ENST00000363521 113 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.145-201ENST00000363527 102 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.202-201ENST00000364083 110 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 SNORA33.2-201ENST00000365413 134 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 MIR600-201ENST00000385007 98 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 MIR454-201ENST00000390180 115 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 RPL5P18-201ENST00000406671 891 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 SNORA77-201ENST00000408716 125 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 BEND7P1-201ENST00000422058 457 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 H2AFZP6-201ENST00000444403 394 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AL590639.1-201ENST00000456484 337 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 PLGLA-201ENST00000465668 449 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC021382.1-201ENST00000483523 359 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC090096.1-201ENST00000489168 390 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 MTCO1P29-201ENST00000496868 288 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC093767.1-201ENST00000504523 156 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC004062.1-201ENST00000509926 645 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 FAM206BP-201ENST00000510179 541 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC093853.1-201ENST00000515689 483 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 RN7SKP219-201ENST00000516825 296 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 Y_RNA.711-201ENST00000516993 102 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 SNORA25.17-201ENST00000517184 124 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 NARSP2-201ENST00000518524 679 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 RPL21P12-201ENST00000559810 515 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC010424.2-201ENST00000607594 443 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC010205.1-201ENST00000616668 449 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AC091953.3-201ENST00000623220 236 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 MAPK10-286ENST00000641208 8747 ntBASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXP3Q9BZS1 AL592148.3-201ENST00000608771 2646 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 SNORA51.8-201ENST00000384234 132 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RNU6-39P-201ENST00000384344 107 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RNU6-1297P-201ENST00000384415 104 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RNA5SP345-201ENST00000410646 108 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RNU2-62P-201ENST00000410868 191 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 CHIAP3-201ENST00000423668 1133 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 Z82205.1-201ENST00000428456 297 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 MTND5P28-201ENST00000438005 1594 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AL354714.3-201ENST00000447284 493 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RPL7P52-201ENST00000449200 742 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RPS3AP41-201ENST00000462701 778 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC108751.2-201ENST00000469993 231 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RPL21P99-201ENST00000480369 423 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC091885.1-201ENST00000506658 268 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC012339.2-201ENST00000523996 453 ntBASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FOXP3Q9BZS1 AL008729.2-201ENST00000606393 473 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms