Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.626-201ENST00000411288 95 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 NME1P1-201ENST00000420914 382 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 CYCSP12-201ENST00000437729 300 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 RAC1P7-201ENST00000445367 377 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC006967.1-201ENST00000467608 589 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AL136126.1-201ENST00000473603 402 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 RN7SL561P-201ENST00000488553 281 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 HMGN2P36-201ENST00000529541 409 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC063949.1-201ENST00000552900 865 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AL121576.1-201ENST00000556055 276 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC106782.4-201ENST00000568264 210 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC104465.1-201ENST00000611365 139 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 MRPL57P1-201ENST00000621486 265 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC093278.2-201ENST00000564956 2485 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 AC005332.9-201ENST00000620266 2921 ntBASIC5.68□□□□□ -1.5
CNTNAP3Q9BZ76 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RNA5SP183-201ENST00000362452 119 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-1020P-201ENST00000363684 107 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RNU1-130P-201ENST00000363930 160 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 SNORA70.2-201ENST00000364506 135 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.273-201ENST00000364703 102 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AL136372.1-201ENST00000403060 228 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-174P-201ENST00000410406 106 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-387P-201ENST00000411331 105 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RPL21P109-201ENST00000422213 475 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 H3F3BP1-201ENST00000440551 403 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RNU7-59P-201ENST00000459101 61 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 COX6CP14-201ENST00000469580 174 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-911P-201ENST00000516523 104 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 MRPS18CP4-201ENST00000535821 231 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AC093227.2-201ENST00000589357 285 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AC005191.1-201ENST00000603950 358 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AC141002.1-201ENST00000607025 279 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AC009570.1-201ENST00000609599 745 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AC126915.2-201ENST00000610957 190 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AC074141.1-201ENST00000588129 2995 ntBASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3Q9BZ76 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms