Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.22□□□□□ -1.89
SCAPERQ9BY12 MIR4781-201ENST00000585250 76 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 AL356575.1-201ENST00000603008 283 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 AC093673.2-201ENST00000609674 331 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 BTBD10P2-201ENST00000404779 676 ntBASIC3.21□□□□□ -1.9
SCAPERQ9BY12 AL354719.1-201ENST00000406535 843 ntBASIC3.21□□□□□ -1.9
SCAPERQ9BY12 AC005517.2-201ENST00000424673 553 ntBASIC3.21□□□□□ -1.9
SCAPERQ9BY12 AC109583.1-201ENST00000432156 268 ntBASIC3.21□□□□□ -1.9
SCAPERQ9BY12 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 ARL4AP2-201ENST00000507378 601 ntBASIC3.21□□□□□ -1.9
SCAPERQ9BY12 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.21□□□□□ -1.9
SCAPERQ9BY12 RPL23AP20-201ENST00000447965 421 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 AL109741.2-201ENST00000455561 343 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAPERQ9BY12 OR52A4P-203ENST00000498233 1014 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 GNAI2P1-201ENST00000541815 315 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
SCAPERQ9BY12 OR4U1P-201ENST00000554958 912 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 CD24P2-201ENST00000565486 219 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 CU459211.1-201ENST00000635667 749 ntBASIC3.2□□□□□ -1.9
SCAPERQ9BY12 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAPERQ9BY12 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAPERQ9BY12 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 RN7SKP226-201ENST00000364912 300 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 HMGB1P11-201ENST00000413899 637 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AC092832.1-201ENST00000422934 400 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 TVP23BP2-201ENST00000455082 615 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 ZNF271P-202ENST00000465539 1970 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 CYP3A51P-201ENST00000633513 256 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 MIR583-201ENST00000384846 75 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 NPM1P10-201ENST00000398310 865 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 SNRPFP2-201ENST00000440710 251 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AL118520.1-201ENST00000450770 291 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AC233279.1-201ENST00000455300 423 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAPERQ9BY12 GMCL1P2-201ENST00000605230 823 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 snoU13.31-201ENST00000607291 104 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 YWHAEP7-203ENST00000622054 312 ntBASIC3.19□□□□□ -1.9
SCAPERQ9BY12 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 RLIMP2-201ENST00000427891 1563 ntBASIC3.18□□□□□ -1.9
SCAPERQ9BY12 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 SNORA48.3-201ENST00000391081 134 ntBASIC3.18□□□□□ -1.9
SCAPERQ9BY12 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 AC009237.8-201ENST00000445492 379 ntBASIC3.18□□□□□ -1.9
SCAPERQ9BY12 TRBV26-201ENST00000456572 344 ntBASIC3.18□□□□□ -1.9
SCAPERQ9BY12 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 RNA5SP402-201ENST00000517148 110 ntBASIC3.18□□□□□ -1.9
SCAPERQ9BY12 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 DUXAP3-201ENST00000603616 594 ntBASIC3.18□□□□□ -1.9
SCAPERQ9BY12 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.18□□□□□ -1.9
SCAPERQ9BY12 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCAPERQ9BY12 METTL21EP-201ENST00000298105 713 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 RNU1-51P-201ENST00000365345 176 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.17□□□□□ -1.9
SCAPERQ9BY12 RAB9AP5-201ENST00000437794 597 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 RAB9AP2-201ENST00000443911 597 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AC098583.1-201ENST00000480875 255 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.17□□□□□ -1.9
SCAPERQ9BY12 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AC078814.3-201ENST00000553036 491 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AC110588.1-201ENST00000559699 137 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AC002064.3-201ENST00000623448 346 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 AL121594.5-201ENST00000631724 573 ntBASIC3.17□□□□□ -1.9
SCAPERQ9BY12 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCAPERQ9BY12 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.16□□□□□ -1.9
SCAPERQ9BY12 SAR1AP2-201ENST00000392696 594 ntBASIC3.16□□□□□ -1.9
SCAPERQ9BY12 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
SCAPERQ9BY12 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.16□□□□□ -1.9
SCAPERQ9BY12 MTCYBP14-201ENST00000457471 715 ntBASIC3.16□□□□□ -1.9
SCAPERQ9BY12 AC004263.1-201ENST00000479327 332 ntBASIC3.16□□□□□ -1.9
SCAPERQ9BY12 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.16□□□□□ -1.9
SCAPERQ9BY12 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.16□□□□□ -1.9
SCAPERQ9BY12 ZNF192P1-203ENST00000565888 810 ntBASIC3.16□□□□□ -1.9
SCAPERQ9BY12 AC128687.1-201ENST00000605304 619 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms