Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC011369.2-201ENST00000624423 1567 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USB1Q9BQ65 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USB1Q9BQ65 COX6B1P3-201ENST00000312310 260 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 RNA5SP350-201ENST00000363298 111 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 RNU6-1035P-201ENST00000384477 107 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AL590635.1-201ENST00000406314 586 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 RN7SKP221-201ENST00000410420 301 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 RNU2-50P-201ENST00000410494 143 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 CYCSP10-201ENST00000417973 294 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC099336.2-201ENST00000422457 254 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC099560.2-201ENST00000457554 255 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC098818.1-201ENST00000478593 252 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC092349.1-201ENST00000504903 310 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC027288.2-201ENST00000553028 243 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 RPL21P7-201ENST00000557463 483 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC023968.1-201ENST00000560719 475 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 CTSLP2-201ENST00000580501 394 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC011476.5-201ENST00000615594 130 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 SNX18P10-201ENST00000625014 519 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 PABPC1P6-201ENST00000445594 1829 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 TATDN2P3-201ENST00000452855 3665 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 AC022905.1-201ENST00000503430 3048 ntBASIC5.82□□□□□ -1.48
USB1Q9BQ65 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.82□□□□□ -1.48
USB1Q9BQ65 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USB1Q9BQ65 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC008725.1-201ENST00000605123 2263 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 RN7SKP227-201ENST00000364445 330 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 Y_RNA.504-201ENST00000384481 104 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 RNU6-1154P-201ENST00000391001 104 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 GLULP6-201ENST00000399502 913 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 SNORD56-201ENST00000413522 71 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC016769.2-201ENST00000414815 475 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AL133482.1-201ENST00000415988 498 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AL592045.1-201ENST00000429867 352 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 U8.22-201ENST00000459141 133 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC034236.1-201ENST00000469891 373 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 RN7SL568P-201ENST00000493069 298 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC093870.1-201ENST00000506837 213 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 RNU7-175P-201ENST00000515915 61 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 RNU6-313P-201ENST00000516317 112 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 SNORA74.1-201ENST00000516320 180 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 RN7SL208P-201ENST00000577964 296 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 RPL29P33-201ENST00000587474 316 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.81□□□□□ -1.48
USB1Q9BQ65 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
USB1Q9BQ65 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USB1Q9BQ65 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.8□□□□□ -1.48
USB1Q9BQ65 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USB1Q9BQ65 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms