Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RN7SL807P-201ENST00000470923 297 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS2Q99743 RN7SL283P-201ENST00000489055 303 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS2Q99743 SNORD59.2-201ENST00000516873 68 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.11□□□□□ -1.91
NPAS2Q99743 AC068339.2-201ENST00000534395 618 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.11□□□□□ -1.91
NPAS2Q99743 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS2Q99743 AC090666.1-201ENST00000578241 445 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS2Q99743 AF131215.7-201ENST00000602443 707 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AL606834.2-201ENST00000602954 668 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AL592148.2-201ENST00000612210 372 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 AC002076.2-201ENST00000617362 122 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS2Q99743 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.11□□□□□ -1.91
NPAS2Q99743 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS2Q99743 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS2Q99743 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS2Q99743 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS2Q99743 MAPK10-362ENST00000641864 4484 ntBASIC3.11□□□□□ -1.91
NPAS2Q99743 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS2Q99743 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS2Q99743 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NPAS2Q99743 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS2Q99743 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 RNU6-173P-201ENST00000364215 104 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 RNU6-878P-201ENST00000384578 110 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 MIR506-201ENST00000384998 124 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 RNU6-1300P-201ENST00000391046 108 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 RNU2-15P-201ENST00000410692 191 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 HMGN1P24-201ENST00000412282 298 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 RPL7P30-201ENST00000420888 709 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS2Q99743 AL645638.1-201ENST00000440519 361 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS2Q99743 RPL36AP33-201ENST00000450395 310 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS2Q99743 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS2Q99743 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.1□□□□□ -1.91
NPAS2Q99743 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS2Q99743 RPL7P38-201ENST00000488396 739 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 APOOP4-201ENST00000513530 597 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 RNU6-711P-201ENST00000517255 106 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 AC104417.1-201ENST00000523974 751 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.1□□□□□ -1.91
NPAS2Q99743 AC087894.1-201ENST00000538359 518 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.1□□□□□ -1.91
NPAS2Q99743 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS2Q99743 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.1□□□□□ -1.91
NPAS2Q99743 AP005205.1-201ENST00000563503 508 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.1□□□□□ -1.91
NPAS2Q99743 ZNF415P1-201ENST00000582279 1166 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS2Q99743 AC008962.1-201ENST00000605729 304 ntBASIC3.1□□□□□ -1.91
NPAS2Q99743 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS2Q99743 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NPAS2Q99743 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS2Q99743 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS2Q99743 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPAS2Q99743 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NPAS2Q99743 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.91
NPAS2Q99743 Z83843.1-201ENST00000604070 3685 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AL357075.1-201ENST00000404107 726 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC012498.1-201ENST00000424037 437 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 USP9YP36-201ENST00000424581 829 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC004866.2-201ENST00000438285 481 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NPAS2Q99743 ATP5C1P1-201ENST00000441945 895 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC015908.1-201ENST00000478739 476 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 ERHP1-201ENST00000523006 310 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 TRAV37-201ENST00000553906 342 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.09□□□□□ -1.91
NPAS2Q99743 AC122134.1-202ENST00000569111 1201 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AC090079.2-201ENST00000575289 768 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS2Q99743 CKS1BP3-201ENST00000600888 237 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AL162713.1-201ENST00000604480 262 ntBASIC3.09□□□□□ -1.91
NPAS2Q99743 AC106028.5-201ENST00000610332 395 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms