Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RPL12P34-201ENST00000424532 479 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL18P10-201ENST00000425606 538 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC016691.1-201ENST00000441321 413 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC009220.1-201ENST00000451614 275 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-1208P-201ENST00000459588 107 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 SNORD19B-201ENST00000459623 84 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC021205.1-201ENST00000468797 348 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC015724.1-201ENST00000478577 156 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AL035404.1-201ENST00000497982 568 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC112204.1-201ENST00000502591 103 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC134698.5-201ENST00000519444 336 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 GSTP1P1-201ENST00000548078 319 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC026470.2-201ENST00000561492 181 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RN7SL176P-201ENST00000580352 264 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC010525.2-201ENST00000590920 195 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AL627309.6-201ENST00000606857 840 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 uc_338.5-201ENST00000611839 155 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC233309.1-201ENST00000619522 751 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AC145207.9-201ENST00000623802 325 ntBASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP1Q96SZ6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
CDK5RAP1Q96SZ6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.65
CDK5RAP1Q96SZ6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 LARP1BP1-201ENST00000506036 1359 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.481-201ENST00000384373 102 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1105P-201ENST00000384774 107 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1304P-201ENST00000411374 106 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC127391.1-201ENST00000411737 98 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 MTCO3P46-201ENST00000425787 232 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 Z82205.1-201ENST00000428456 297 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL23AP25-201ENST00000430973 463 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 SKP1P1-201ENST00000438081 489 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 CACYBPP1-201ENST00000438592 684 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 GEMIN8P3-201ENST00000445417 720 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 NF1P3-201ENST00000457709 450 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 RPS27AP17-201ENST00000463344 455 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC130509.1-201ENST00000464158 433 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 RN7SL810P-201ENST00000493031 276 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC111193.1-201ENST00000504097 155 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC093809.1-201ENST00000509155 340 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 SNORA19.2-201ENST00000516013 114 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 RNA5SP497-201ENST00000516081 97 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1220P-201ENST00000517126 108 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL109766.1-201ENST00000555080 552 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC055876.1-202ENST00000567053 138 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 NRBF2P1-201ENST00000587407 859 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC016925.2-201ENST00000605108 242 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC021646.1-201ENST00000605469 484 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC090948.1-201ENST00000607464 549 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL133173.2-201ENST00000614270 90 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AC138649.5-201ENST00000637456 137 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 MAPK10-303ENST00000641324 3959 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 NUP58P1-201ENST00000502546 1738 ntBASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP1Q96SZ6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms