| ARAP1 | Q96P48 | ELF3-AS1-201 | ENST00000415582 | 500 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | AL591719.1-201 | ENST00000444669 | 744 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | XKRY-201 | ENST00000510392 | 1100 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | RNU6ATAC9P-201 | ENST00000516210 | 116 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | AP003170.4-201 | ENST00000543486 | 586 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | AL121839.1-201 | ENST00000556233 | 1185 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | AC012379.1-201 | ENST00000558304 | 406 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | AC010547.2-201 | ENST00000568523 | 409 nt | TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | KCNRG-201 | ENST00000312942 | 1527 nt | APPRIS P1 TSL 1 (best) BASIC | 3.59 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | FAM208A-202 | ENST00000431842 | 7119 nt | TSL 1 (best) BASIC | 3.59 | □□□□□ -1.83 | | |
| ARAP1 | Q96P48 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | DEFA7P-201 | ENST00000382676 | 285 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | OR5H15-201 | ENST00000383696 | 930 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | MIR221-201 | ENST00000385135 | 110 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RNU6-328P-201 | ENST00000390887 | 106 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC022022.1-201 | ENST00000430304 | 178 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RNU6-943P-201 | ENST00000516960 | 98 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | MTND2P17-201 | ENST00000550281 | 688 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC007686.2-201 | ENST00000554043 | 469 nt | TSL 2 BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | OR4T1P-201 | ENST00000554933 | 911 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | BLOC1S6-206 | ENST00000564765 | 706 nt | TSL 4 BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | ZEB2-AS1-204 | ENST00000595109 | 855 nt | TSL 5 BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC245517.5-201 | ENST00000611529 | 162 nt | BASIC | 3.59 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | ZNF117-203 | ENST00000610793 | 1374 nt | TSL 2 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | NDST3-201 | ENST00000296499 | 5961 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | ZNF676-201 | ENST00000397121 | 2944 nt | APPRIS P1 TSL 2 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | TAB2-205 | ENST00000538427 | 4240 nt | APPRIS P1 TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AL109914.1-201 | ENST00000414740 | 146 nt | TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RPS24P8-201 | ENST00000431490 | 402 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AL645634.2-201 | ENST00000431956 | 411 nt | TSL 3 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | DNAJC19P4-201 | ENST00000440115 | 345 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | CASP3P1-201 | ENST00000446037 | 609 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC025475.1-201 | ENST00000512939 | 487 nt | TSL 3 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AL358333.1-201 | ENST00000555115 | 467 nt | TSL 3 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | ZFAND6-208 | ENST00000558688 | 780 nt | TSL 2 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | MIR4506-201 | ENST00000584693 | 77 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC002115.1-201 | ENST00000589603 | 568 nt | TSL 4 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC123786.2-201 | ENST00000603459 | 275 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | LINC00397-202 | ENST00000606785 | 409 nt | TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | SATB1-AS1-266 | ENST00000630271 | 813 nt | TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | CYP3A51P-201 | ENST00000633513 | 256 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RICTOR-201 | ENST00000296782 | 7505 nt | TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | CPB2-201 | ENST00000181383 | 1717 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC008432.1-201 | ENST00000615912 | 1320 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | ATXN3L-201 | ENST00000380622 | 2164 nt | APPRIS P1 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | PPP2R5A-205 | ENST00000537030 | 1719 nt | TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | MIR583-201 | ENST00000384846 | 75 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RNU6-603P-201 | ENST00000411403 | 107 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AL357140.2-201 | ENST00000445884 | 440 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AL365204.2-201 | ENST00000446754 | 687 nt | TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC003988.1-201 | ENST00000447198 | 578 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | NAMPTP2-201 | ENST00000505629 | 1115 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC113167.1-201 | ENST00000512941 | 570 nt | TSL 4 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | CCNHP1-201 | ENST00000513311 | 678 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | PPFIA2-AS1-202 | ENST00000549161 | 1080 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | TPMTP1-201 | ENST00000592307 | 737 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC004241.3-201 | ENST00000611728 | 517 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | UBE2Q2P2-203 | ENST00000613592 | 761 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC000123.2-201 | ENST00000623124 | 461 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | MACF1-204 | ENST00000372915 | 23440 nt | APPRIS ALT2 TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | CCDC168-201 | ENST00000322527 | 21466 nt | APPRIS P1 TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | FKTN-201 | ENST00000223528 | 7364 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RNU4-62P-201 | ENST00000410125 | 130 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AP000275.1-201 | ENST00000411943 | 390 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | LINC01646-201 | ENST00000420522 | 682 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | SAR1AP4-201 | ENST00000429225 | 591 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC026167.1-201 | ENST00000435651 | 299 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RNA5SP385-201 | ENST00000515947 | 110 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC092326.1-201 | ENST00000567465 | 674 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC064805.2-201 | ENST00000582959 | 523 nt | TSL 4 BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC108479.2-201 | ENST00000617314 | 601 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RPS6KA6-204 | ENST00000620340 | 8169 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AP000233.1-201 | ENST00000426609 | 291 nt | TSL 3 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | LINC02532-205 | ENST00000430094 | 628 nt | TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | LINC00353-201 | ENST00000435401 | 685 nt | TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | USP9YP7-201 | ENST00000436723 | 430 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | USP9YP32-201 | ENST00000452432 | 430 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC233279.1-201 | ENST00000455300 | 423 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RPL23AP62-201 | ENST00000463396 | 453 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | TIPARP-AS1-202 | ENST00000478005 | 554 nt | TSL 4 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC010406.1-201 | ENST00000507948 | 555 nt | TSL 3 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC104350.1-201 | ENST00000518750 | 877 nt | TSL 3 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | OR4A15-202 | ENST00000641526 | 945 nt | APPRIS P1 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | LUM-201 | ENST00000266718 | 3008 nt | APPRIS P1 TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | TLK1-206 | ENST00000434911 | 2156 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | SLC9C2-201 | ENST00000367714 | 4428 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | HMGB1P10-201 | ENST00000395823 | 563 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AL354719.1-201 | ENST00000406535 | 843 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | SNORA11.4-201 | ENST00000408823 | 129 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | PPP3R1-202 | ENST00000409377 | 684 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | LINC01821-201 | ENST00000419786 | 1084 nt | TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC025300.1-201 | ENST00000526616 | 384 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC055720.2-201 | ENST00000537724 | 172 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC012182.1-201 | ENST00000570133 | 895 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | RMST_2.1-201 | ENST00000617263 | 136 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AC098798.1-201 | ENST00000503998 | 1447 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | AL161431.1-201 | ENST00000618966 | 4205 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | CUBN-201 | ENST00000377823 | 705 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | MTND4LP21-201 | ENST00000415303 | 295 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| ARAP1 | Q96P48 | MTATP6P11-201 | ENST00000428071 | 670 nt | BASIC | 3.54 | □□□□□ -1.84 | | |