Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CYCSP32-201ENST00000440548 321 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 MTCO3P27-201ENST00000514397 196 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC008885.1-201ENST00000514930 301 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 RN7SKP272-201ENST00000516988 232 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AP003355.1-201ENST00000518956 587 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 OR4R2P-201ENST00000530815 597 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC010653.1-201ENST00000571108 881 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 MTCO3P24-201ENST00000572729 782 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 MAGOH2P-202ENST00000584384 429 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC006539.2-201ENST00000601729 572 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AL512506.2-201ENST00000624472 458 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 RNA5SP383-201ENST00000362934 120 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 RNU6-657P-201ENST00000383904 107 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC092447.6-201ENST00000414578 210 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 Z93242.1-201ENST00000427102 353 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC241584.1-201ENST00000438469 1241 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC140076.1-201ENST00000449897 361 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 RPL27AP5-201ENST00000469428 449 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC009812.2-201ENST00000517657 457 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC023632.1-201ENST00000518463 375 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC239860.2-201ENST00000525886 270 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 OR4P1P-201ENST00000530808 1136 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 CYB5AP5-201ENST00000549779 389 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 MIR4325-201ENST00000583049 90 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AP001542.2-201ENST00000593141 364 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC073387.2-201ENST00000604797 784 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AC131902.3-201ENST00000611767 581 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 AL360181.4-201ENST00000621752 134 ntBASIC3.17□□□□□ -1.9
RPRD1AQ96P16 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.17□□□□□ -1.9
RPRD1AQ96P16 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 ZNF807-201ENST00000328088 1707 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 SNORA48.5-201ENST00000391143 135 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AC016769.3-201ENST00000396562 315 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AL138885.1-201ENST00000405921 675 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AL355615.1-201ENST00000406187 641 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 DUTP6-201ENST00000425573 462 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 RPL21P2-201ENST00000440049 481 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 MTND2P19-201ENST00000449129 1012 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AL445669.2-201ENST00000454425 421 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AL590639.1-201ENST00000456484 337 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 NAMPTP2-201ENST00000505629 1115 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 RNU6-27P-201ENST00000516146 107 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 SNORA48.10-201ENST00000516965 160 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 PSMA2P1-201ENST00000526365 646 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AP002404.1-201ENST00000532005 451 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AL157394.1-201ENST00000562983 1224 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AP003973.1-201ENST00000604639 691 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 AC084824.5-201ENST00000612009 413 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms