Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 OR4A45P-201ENST00000529954 901 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CFAP54Q96N23 DCAF13P1-201ENST00000495256 1330 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 AL391987.6-201ENST00000305671 199 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.01□□□□□ -2.09
CFAP54Q96N23 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CFAP54Q96N23 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.01□□□□□ -2.09
CFAP54Q96N23 AC055876.1-202ENST00000567053 138 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.01□□□□□ -2.09
CFAP54Q96N23 SNRPGP19-201ENST00000603826 189 ntBASIC2.01□□□□□ -2.09
CFAP54Q96N23 MTCO1P7-201ENST00000419523 1542 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 AC234782.4-201ENST00000417646 1048 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 AL159169.1-201ENST00000421119 127 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2□□□□□ -2.09
CFAP54Q96N23 MTND3P6-201ENST00000485242 339 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2□□□□□ -2.09
CFAP54Q96N23 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2□□□□□ -2.09
CFAP54Q96N23 AC019159.1-201ENST00000605094 187 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2□□□□□ -2.09
CFAP54Q96N23 MIR96-201ENST00000362288 78 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2□□□□□ -2.09
CFAP54Q96N23 GAPDHP27-201ENST00000447427 1020 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2□□□□□ -2.09
CFAP54Q96N23 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2□□□□□ -2.09
CFAP54Q96N23 BMS1P7-201ENST00000602440 1052 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
CFAP54Q96N23 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CFAP54Q96N23 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 RNU2-32P-201ENST00000411193 191 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 TRIM60P13-201ENST00000432350 1283 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.99□□□□□ -2.09
CFAP54Q96N23 snoU109.4-201ENST00000458953 143 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.99□□□□□ -2.09
CFAP54Q96N23 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CFAP54Q96N23 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CFAP54Q96N23 AC012498.1-201ENST00000424037 437 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 AL645939.1-201ENST00000453429 797 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.99□□□□□ -2.09
CFAP54Q96N23 MIR7973-1-201ENST00000614683 76 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CFAP54Q96N23 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CFAP54Q96N23 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CFAP54Q96N23 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.99□□□□□ -2.09
CFAP54Q96N23 AL445669.2-201ENST00000454425 421 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 RPS27P29-201ENST00000463110 252 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CFAP54Q96N23 MIR6734-201ENST00000621166 68 ntBASIC1.99□□□□□ -2.09
CFAP54Q96N23 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CFAP54Q96N23 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CFAP54Q96N23 VN1R31P-201ENST00000417498 730 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 RPL36AP6-201ENST00000435770 321 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 RNU7-170P-201ENST00000459303 61 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 AC011352.3-201ENST00000505162 593 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.98□□□□□ -2.09
CFAP54Q96N23 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.98□□□□□ -2.09
CFAP54Q96N23 AC234775.3-201ENST00000564612 656 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 MIR6766-201ENST00000622641 72 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 CU459211.1-201ENST00000635667 749 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CFAP54Q96N23 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
CFAP54Q96N23 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
CFAP54Q96N23 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CFAP54Q96N23 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CFAP54Q96N23 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.98□□□□□ -2.09
CFAP54Q96N23 MED6P1-201ENST00000439659 713 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CFAP54Q96N23 AC017099.1-201ENST00000448261 1028 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 BX322784.1-201ENST00000455793 1077 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.98□□□□□ -2.09
CFAP54Q96N23 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.98□□□□□ -2.09
CFAP54Q96N23 AP001804.3-201ENST00000525146 880 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 AC092650.2-201ENST00000619984 902 ntBASIC1.98□□□□□ -2.09
CFAP54Q96N23 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CFAP54Q96N23 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CFAP54Q96N23 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 Y_RNA.251-201ENST00000364551 99 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 SAR1AP2-201ENST00000392696 594 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 RNA5SP38-201ENST00000410750 119 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CFAP54Q96N23 RPL9P33-201ENST00000484311 566 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 MTND5P12-201ENST00000502851 1449 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 RNA5SP476-201ENST00000516613 103 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 AL606537.1-201ENST00000607258 2011 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 AC009237.8-201ENST00000445492 379 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 AC093767.1-201ENST00000504523 156 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 OR4P1P-201ENST00000530808 1136 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 AP005137.2-201ENST00000609238 400 ntBASIC1.97□□□□□ -2.09
CFAP54Q96N23 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CFAP54Q96N23 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.97□□□□□ -2.09
CFAP54Q96N23 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms