Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC008507.1-201ENST00000587506 734 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC106900.2-201ENST00000604994 317 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC012360.2-201ENST00000609349 391 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 OR10AB1P-201ENST00000609613 938 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC008121.2-201ENST00000614647 523 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC068057.2-201ENST00000624047 895 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AL159972.1-201ENST00000625150 448 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AL138713.1-201ENST00000624026 2130 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC021755.1-201ENST00000559747 1447 ntBASIC3.61□□□□□ -1.83
CMTM3Q96MX0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC118273.1-201ENST00000525324 3006 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 DDX10P1-201ENST00000448545 1933 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 ZNF826P-207ENST00000622273 1910 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 Y_RNA.46-201ENST00000362695 102 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 RNU6-223P-201ENST00000362830 107 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 RNU5F-7P-201ENST00000363696 115 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 RNU6-432P-201ENST00000384196 109 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 RPL27AP8-201ENST00000424277 446 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 KCTD9P3-201ENST00000434597 1169 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 ISCA1P2-201ENST00000438679 421 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC118469.1-201ENST00000442943 488 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AL592447.1-201ENST00000447592 540 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 RPL23AP41-201ENST00000484754 458 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC135721.1-201ENST00000497954 479 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 Y_RNA.688-201ENST00000516565 95 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 IGKV1-32-201ENST00000519290 311 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 MTCO1P49-201ENST00000523429 802 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 MIR3921-201ENST00000577308 85 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC068790.3-201ENST00000602988 553 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC093838.1-201ENST00000613014 469 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 U7.8-201ENST00000619968 63 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC008013.2-202ENST00000637965 364 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 AC007256.1-201ENST00000392253 2765 ntBASIC3.6□□□□□ -1.83
CMTM3Q96MX0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CMTM3Q96MX0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 AL590240.1-201ENST00000334118 313 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 RNU1-18P-201ENST00000363062 164 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 RNU6-809P-201ENST00000384461 107 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 MIR19A-201ENST00000384878 82 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 MT-TH-201ENST00000387441 69 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 CCNG1P1-201ENST00000406783 885 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 AC078974.1-201ENST00000411597 223 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 AL139095.3-201ENST00000419672 1203 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 AC104837.2-201ENST00000427236 424 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.59□□□□□ -1.83
CMTM3Q96MX0 SKP1P1-201ENST00000438081 489 ntBASIC3.59□□□□□ -1.83
CMTM3Q96MX0 AC006466.1-201ENST00000438721 289 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms