Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 CKS1BP3-201ENST00000600888 237 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AL031985.2-201ENST00000600955 480 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AL606834.2-201ENST00000602954 668 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 BNIP3P31-201ENST00000604515 566 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AC012468.1-201ENST00000604888 430 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AC112220.2-201ENST00000605513 533 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AC106028.5-201ENST00000610332 395 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AC018816.2-201ENST00000621460 353 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AC073348.1-201ENST00000623002 331 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AL356585.4-201ENST00000623078 1229 ntBASIC3.65□□□□□ -1.83
CCDC43Q96MW1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CCDC43Q96MW1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CCDC43Q96MW1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC009487.2-201ENST00000420969 6821 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 RNU1-70P-201ENST00000362618 164 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 RNU6-216P-201ENST00000363282 104 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 RNA5SP387-201ENST00000364226 106 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 RNU6-1000P-201ENST00000391066 106 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC063979.1-201ENST00000415539 377 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AL353678.1-201ENST00000422735 741 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 BX890604.2-201ENST00000427883 474 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC005300.1-201ENST00000428401 373 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 USP9YP22-201ENST00000438971 294 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC092427.1-201ENST00000439177 601 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 MTCYBP34-201ENST00000439552 670 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 Z99127.3-201ENST00000448158 395 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 Z82190.1-201ENST00000454534 490 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC091153.1-201ENST00000466297 402 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 RN7SL807P-201ENST00000470923 297 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 ST13P14-201ENST00000474095 734 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 HMGN2P13-201ENST00000476476 274 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 COX7A2P2-201ENST00000505291 250 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 TXNP6-201ENST00000510190 310 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 SNORA19.3-201ENST00000516165 130 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 SNORA64.4-201ENST00000516632 81 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC022690.1-201ENST00000526681 550 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AL391156.1-201ENST00000554965 554 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AL022099.1-201ENST00000604551 712 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AC008962.1-201ENST00000605729 304 ntBASIC3.64□□□□□ -1.83
CCDC43Q96MW1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC43Q96MW1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 MIR208A-201ENST00000362287 71 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 SNORA70.4-201ENST00000365509 134 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 U3.42-201ENST00000408746 214 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 OR4K6P-201ENST00000416478 897 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC245291.1-201ENST00000419501 328 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 RPL7P44-201ENST00000424827 742 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC005297.2-201ENST00000450430 606 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC069528.1-202ENST00000482888 637 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC079203.1-201ENST00000487972 404 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC104027.1-201ENST00000521887 300 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 MIR5680-201ENST00000577577 84 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 MAGOH2P-202ENST00000584384 429 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 DNAJC19P3-201ENST00000594491 331 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AL390838.2-201ENST00000602394 274 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AL022067.1-201ENST00000602426 454 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AL606834.3-201ENST00000602615 496 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC024060.1-201ENST00000607052 494 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AP002371.2-201ENST00000624450 503 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AC120349.2-201ENST00000625002 298 ntBASIC3.63□□□□□ -1.83
CCDC43Q96MW1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC43Q96MW1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 RNU5D-1-201ENST00000363299 116 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 snoZ40.1-201ENST00000364540 72 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AL357075.1-201ENST00000404107 726 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 RPS15AP38-201ENST00000413110 372 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 MRPL50P2-201ENST00000416821 482 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC007435.1-201ENST00000421086 415 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 GTF2IP3-201ENST00000433887 494 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 MUPP-201ENST00000438111 566 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms