Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AL158211.1-201ENST00000566763 763 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC091057.2-201ENST00000602594 792 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AP003973.1-201ENST00000604639 691 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC008962.1-201ENST00000605729 304 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC107952.2-201ENST00000606048 486 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC034229.4-201ENST00000607861 441 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC024257.5-201ENST00000612739 531 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC079395.3-201ENST00000615161 484 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AP001002.2-201ENST00000625137 386 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC127502.3-201ENST00000636170 1206 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00477Q96M19 ZNF734P-201ENST00000419494 1534 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC00477Q96M19 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00477Q96M19 Z83843.1-201ENST00000604070 3685 ntBASIC2.45□□□□□ -2.02
LINC00477Q96M19 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 RNU4-35P-201ENST00000362588 141 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 RNU6-799P-201ENST00000363567 107 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 SNORA72.3-201ENST00000365074 132 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 U8.9-201ENST00000365667 134 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 RNU6-1027P-201ENST00000383998 107 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 SNORA5A-201ENST00000384111 134 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 SNORA57.1-201ENST00000391227 145 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL136310.1-201ENST00000404926 654 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 RNA5SP56-201ENST00000410277 118 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 RN7SKP202-201ENST00000410439 330 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 BX323014.1-201ENST00000412876 237 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 SDCBPP3-201ENST00000419629 891 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL513175.2-201ENST00000422071 443 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL035410.1-201ENST00000427409 427 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 SETP8-201ENST00000435341 628 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 HSPD1P21-201ENST00000436541 245 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 ATP5C1P1-201ENST00000441945 895 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC092155.2-201ENST00000454675 477 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 BTF3P5-201ENST00000457252 467 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC011979.1-201ENST00000472300 483 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00477Q96M19 HSPE1P23-201ENST00000509838 286 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 RNU6-488P-201ENST00000515918 99 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC245166.1-201ENST00000521012 253 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC090502.2-201ENST00000549267 280 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL391156.1-201ENST00000554965 554 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AADACP1-206ENST00000561502 1193 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL355812.1-201ENST00000603215 216 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 RPP40P2-201ENST00000603596 712 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC092954.1-201ENST00000609121 445 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AP001521.1-201ENST00000609150 300 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL355816.2-201ENST00000610049 647 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC023510.2-201ENST00000622162 746 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AL356863.1-201ENST00000623378 1080 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00477Q96M19 AP003122.5-201ENST00000527668 3766 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 AC090740.1-201ENST00000623193 2262 ntBASIC2.44□□□□□ -2.02
LINC00477Q96M19 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00477Q96M19 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00477Q96M19 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms