Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC234781.5-201ENST00000508429 271 ntBASIC3.43□□□□□ -1.86
USP47Q96K76 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
USP47Q96K76 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.43□□□□□ -1.86
USP47Q96K76 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.43□□□□□ -1.86
USP47Q96K76 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.43□□□□□ -1.86
USP47Q96K76 AC006254.3-201ENST00000603353 884 ntBASIC3.43□□□□□ -1.86
USP47Q96K76 OR4H6P-202ENST00000603819 340 ntBASIC3.43□□□□□ -1.86
USP47Q96K76 AC003001.2-201ENST00000616294 831 ntBASIC3.43□□□□□ -1.86
USP47Q96K76 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
USP47Q96K76 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.43□□□□□ -1.86
USP47Q96K76 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP47Q96K76 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP47Q96K76 MTND4P8-201ENST00000514997 1362 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
USP47Q96K76 RNA5SP27-201ENST00000363839 119 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
USP47Q96K76 AL158825.1-201ENST00000414735 521 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.42□□□□□ -1.86
USP47Q96K76 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.42□□□□□ -1.86
USP47Q96K76 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.42□□□□□ -1.86
USP47Q96K76 RPS27P27-201ENST00000498779 255 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.42□□□□□ -1.86
USP47Q96K76 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.42□□□□□ -1.86
USP47Q96K76 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.42□□□□□ -1.86
USP47Q96K76 IGKV3-31-201ENST00000523109 329 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 AC026616.1-201ENST00000523157 525 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP47Q96K76 AC012467.1-201ENST00000607740 256 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.42□□□□□ -1.86
USP47Q96K76 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP47Q96K76 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP47Q96K76 MTCO1P18-201ENST00000455518 1419 ntBASIC3.42□□□□□ -1.86
USP47Q96K76 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP47Q96K76 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.41□□□□□ -1.86
USP47Q96K76 Z98742.3-201ENST00000418637 326 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.41□□□□□ -1.86
USP47Q96K76 RSL24D1P8-201ENST00000434442 492 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 YWHAZP8-201ENST00000436935 731 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP47Q96K76 TRAV31-201ENST00000502780 342 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 OR5H5P-201ENST00000503164 928 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.41□□□□□ -1.86
USP47Q96K76 AC008837.1-201ENST00000511513 412 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 AC026412.2-201ENST00000512270 1075 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 MTCO1P30-201ENST00000515244 580 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 SNORA31.1-201ENST00000515993 133 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 SNORA31.5-201ENST00000516190 133 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 RNU6-362P-201ENST00000516736 90 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 HMGB1P41-201ENST00000520234 440 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.41□□□□□ -1.86
USP47Q96K76 AL160237.3-201ENST00000604114 1013 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 AC018926.3-201ENST00000618841 406 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 AC017104.5-201ENST00000637647 639 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
USP47Q96K76 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
USP47Q96K76 MTND5P11-201ENST00000511037 1812 ntBASIC3.41□□□□□ -1.86
USP47Q96K76 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
USP47Q96K76 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP47Q96K76 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
USP47Q96K76 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP47Q96K76 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 BX276092.3-201ENST00000424182 230 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 NANOGP5-201ENST00000424456 877 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 HMGB3P12-201ENST00000438745 556 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 RPS12P2-201ENST00000439728 269 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 AL035407.2-201ENST00000454090 378 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.4□□□□□ -1.86
USP47Q96K76 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.4□□□□□ -1.86
USP47Q96K76 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
USP47Q96K76 AC133963.2-201ENST00000513686 578 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 RNU2-58P-201ENST00000516403 183 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.4□□□□□ -1.86
USP47Q96K76 AP003717.3-201ENST00000544832 1180 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 AC022069.1-201ENST00000582910 658 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 AC012254.4-201ENST00000588843 273 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
USP47Q96K76 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
USP47Q96K76 AC022079.2-201ENST00000619739 566 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 MIR1291-201ENST00000627649 87 ntBASIC3.4□□□□□ -1.86
USP47Q96K76 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.4□□□□□ -1.87
USP47Q96K76 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
USP47Q96K76 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.4□□□□□ -1.87
USP47Q96K76 GABPAP-201ENST00000419271 1356 ntBASIC3.4□□□□□ -1.87
USP47Q96K76 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.39□□□□□ -1.87
USP47Q96K76 RNU4-53P-201ENST00000410828 140 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.39□□□□□ -1.87
USP47Q96K76 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.39□□□□□ -1.87
USP47Q96K76 MTCO3P43-201ENST00000440974 771 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.39□□□□□ -1.87
USP47Q96K76 Z77249.1-201ENST00000444622 1175 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.39□□□□□ -1.87
USP47Q96K76 RPL23AP62-201ENST00000463396 453 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.39□□□□□ -1.87
USP47Q96K76 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.39□□□□□ -1.87
USP47Q96K76 AC008885.2-201ENST00000509506 930 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 AC104115.2-201ENST00000523026 687 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 AC010928.3-201ENST00000587712 541 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 HMGN2P28-201ENST00000606102 262 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 AC067747.1-201ENST00000608026 250 ntBASIC3.39□□□□□ -1.87
USP47Q96K76 AC012531.5-201ENST00000611375 151 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms