Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.09□□□□□ -1.59
SHDQ96IW2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHDQ96IW2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHDQ96IW2 DDX18P3-201ENST00000404856 2007 ntBASIC5.09□□□□□ -1.6
SHDQ96IW2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.09□□□□□ -1.6
SHDQ96IW2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SHDQ96IW2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHDQ96IW2 MTND5P3-201ENST00000438536 1800 ntBASIC5.09□□□□□ -1.6
SHDQ96IW2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SHDQ96IW2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SHDQ96IW2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.08□□□□□ -1.6
SHDQ96IW2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 RNU6-552P-201ENST00000362869 119 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 Y_RNA.100-201ENST00000363141 102 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 Y_RNA.509-201ENST00000384506 99 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 RNU6-903P-201ENST00000391270 109 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 RN7SKP106-201ENST00000410832 272 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC114755.2-201ENST00000413520 361 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 NDUFB4P8-201ENST00000435351 367 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.08□□□□□ -1.6
SHDQ96IW2 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 SNRPFP3-201ENST00000457792 225 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.08□□□□□ -1.6
SHDQ96IW2 RPL23AP55-201ENST00000498163 452 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC004062.1-201ENST00000509926 645 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.08□□□□□ -1.6
SHDQ96IW2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.08□□□□□ -1.6
SHDQ96IW2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.08□□□□□ -1.6
SHDQ96IW2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.08□□□□□ -1.6
SHDQ96IW2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.08□□□□□ -1.6
SHDQ96IW2 AC019322.1-201ENST00000571869 389 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 MIR4703-201ENST00000577728 79 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 SNORD84-203ENST00000584275 78 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 AP001486.3-201ENST00000615334 372 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC243312.2-201ENST00000623340 601 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC090617.10-201ENST00000624308 134 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AP003400.5-201ENST00000624827 617 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 AC055839.1-201ENST00000634467 498 ntBASIC5.08□□□□□ -1.6
SHDQ96IW2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SHDQ96IW2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.08□□□□□ -1.6
SHDQ96IW2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.08□□□□□ -1.6
SHDQ96IW2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
SHDQ96IW2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHDQ96IW2 AC009962.1-201ENST00000567327 3813 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHDQ96IW2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHDQ96IW2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHDQ96IW2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHDQ96IW2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHDQ96IW2 XIAPP3-201ENST00000312918 795 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 RNU4-66P-201ENST00000365199 138 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHDQ96IW2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHDQ96IW2 SNORA2.3-201ENST00000383920 135 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHDQ96IW2 RPS7P15-201ENST00000415804 584 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 PDCL2P1-201ENST00000419302 352 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC099677.1-201ENST00000420575 175 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.07□□□□□ -1.6
SHDQ96IW2 AC016831.4-201ENST00000438302 307 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.07□□□□□ -1.6
SHDQ96IW2 ARL2BPP10-201ENST00000446487 531 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 RPS5P7-201ENST00000456664 608 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 HMGN2P26-201ENST00000463169 339 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 RPL21P99-201ENST00000480369 423 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.07□□□□□ -1.6
SHDQ96IW2 AC108145.1-201ENST00000503770 153 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC093840.1-201ENST00000511599 336 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 RNU4-60P-201ENST00000517239 135 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.07□□□□□ -1.6
SHDQ96IW2 BTF3P12-201ENST00000519620 469 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 SUMO2P20-201ENST00000520803 283 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC103843.2-201ENST00000530523 682 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.07□□□□□ -1.6
SHDQ96IW2 AC011611.1-201ENST00000552179 197 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC087477.6-201ENST00000559595 843 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AF038458.1-201ENST00000588406 262 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC012669.1-201ENST00000603209 283 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AP005432.2-201ENST00000608162 586 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 AC068831.8-201ENST00000620171 435 ntBASIC5.07□□□□□ -1.6
SHDQ96IW2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms