Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AL596327.1-201ENST00000603629 213 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 SNRPGP17-201ENST00000603780 214 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 SNORD91B-202ENST00000608459 222 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC139792.3-201ENST00000623525 224 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AC091905.1-201ENST00000624400 311 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.59□□□□□ -1.67
CHFRQ96EP1 AL596275.2-204ENST00000641628 552 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 AL596275.2-206ENST00000641957 626 ntBASIC4.59□□□□□ -1.67
CHFRQ96EP1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC107068.1-201ENST00000563286 4218 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 NEAT1-202ENST00000501122 22743 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 NSRP1P1-201ENST00000444067 1693 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 MIR331-201ENST00000362302 94 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 Y_RNA.128-201ENST00000363391 112 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 RN7SKP44-201ENST00000363602 316 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 SNORA33.2-201ENST00000365413 134 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 SNORA4.3-201ENST00000365564 137 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 RNU6-1105P-201ENST00000384774 107 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 MIR217-201ENST00000384817 110 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 RPS26P8-201ENST00000393490 348 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL161909.1-201ENST00000397390 712 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL080315.1-201ENST00000406055 466 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL354719.1-201ENST00000406535 843 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 RNU6-195P-201ENST00000411352 109 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL353193.1-201ENST00000421444 268 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL031736.2-201ENST00000426573 787 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL365400.1-201ENST00000431854 640 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 Y_RNA.632-201ENST00000459189 102 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 RPL35P6-201ENST00000490024 372 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC111193.1-201ENST00000504097 155 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC015912.2-201ENST00000571053 181 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL162413.1-201ENST00000603198 110 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC113139.1-201ENST00000605049 239 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 MIR492-201ENST00000638676 116 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.58□□□□□ -1.68
CHFRQ96EP1 SAGE2P-201ENST00000420011 2126 ntBASIC4.58□□□□□ -1.68
CHFRQ96EP1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHFRQ96EP1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHFRQ96EP1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHFRQ96EP1 OR11H5P-202ENST00000641612 1325 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC025125.1-201ENST00000624743 1922 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 RN7SKP280-201ENST00000364196 304 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 SNORD42.2-201ENST00000365570 69 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 RNU6-452P-201ENST00000384406 107 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 SNORA51.12-201ENST00000384448 134 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 MIR124-3-201ENST00000384866 87 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL583835.1-201ENST00000399570 407 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 RNA5SP118-201ENST00000410385 109 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL359704.1-201ENST00000411586 781 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 OR9R1P-201ENST00000412200 877 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL358176.2-201ENST00000425769 204 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 Z93242.1-201ENST00000427102 353 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 FCF1P1-201ENST00000432690 571 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 RPL37P21-201ENST00000435890 276 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms