Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 RNU6-263P-201ENST00000363811 107 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 SNORD115-48-201ENST00000364764 76 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 RNU6-1226P-201ENST00000384317 107 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 RNU4-65P-201ENST00000410473 140 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 MTND4P24-201ENST00000424002 397 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AC011816.1-201ENST00000441346 546 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 RSL24D1P2-201ENST00000445584 366 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 MTND1P33-201ENST00000446251 917 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 SRIP1-201ENST00000489235 288 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AP003385.6-201ENST00000531603 374 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 OR5BN1P-201ENST00000532955 829 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AC092470.1-201ENST00000546187 132 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 ELOCP29-201ENST00000588193 334 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AC091057.2-201ENST00000602594 792 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 FRG1HP-204ENST00000617940 757 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AP003400.6-201ENST00000624698 740 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 SCARNA15.3-201ENST00000626315 122 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 SCARNA4.1-201ENST00000628597 123 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.31□□□□□ -2.04
RPS4Y2Q8TD47 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 SNORA18.3-201ENST00000384122 132 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RNA5SP210-201ENST00000391034 120 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AL139095.1-201ENST00000404326 391 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RNU6-272P-201ENST00000411028 104 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RPLP0P7-201ENST00000416050 667 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC073310.1-201ENST00000423226 1033 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 USP9YP36-201ENST00000424581 829 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC233728.2-201ENST00000425348 757 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC073508.1-201ENST00000428866 656 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RPL23AP58-201ENST00000440453 469 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RABEPKP1-201ENST00000440529 1026 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC025750.2-201ENST00000442609 450 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC027673.1-201ENST00000456245 405 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 OR6K1P-201ENST00000456766 971 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RPS23P3-201ENST00000470993 430 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC010301.1-201ENST00000473936 355 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 KC877373.1-201ENST00000479066 408 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RPS27P23-201ENST00000487608 251 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 OR5H5P-201ENST00000503164 928 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 HIGD1AP13-201ENST00000509878 289 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 MTCO3P44-201ENST00000510977 541 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC026801.2-201ENST00000515352 425 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 RNU6-202P-201ENST00000515998 96 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AP001029.3-201ENST00000588063 596 ntBASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPS4Y2Q8TD47 SEC63P2-201ENST00000503863 1939 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 RNU6-1339P-201ENST00000363574 91 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 SNORA5B-201ENST00000363786 132 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 RNU6-339P-201ENST00000384310 107 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 Y_RNA.493-201ENST00000384422 102 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 MT-TC-201ENST00000387405 66 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 SSXP10-201ENST00000402595 565 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 ATP5F1P6-201ENST00000402768 767 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 ARL2BPP3-201ENST00000421226 480 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 AC114973.1-201ENST00000429057 632 ntBASIC2.29□□□□□ -2.04
RPS4Y2Q8TD47 AC005189.1-201ENST00000431286 310 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms