Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC005592.1-201ENST00000566527 1640 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 RN7SKP153-201ENST00000365026 316 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.389-201ENST00000383924 113 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 UBE2V1P2-201ENST00000397758 440 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 EIF5P1-201ENST00000400019 1231 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC093156.1-201ENST00000440382 670 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 CEACAMP9-201ENST00000442990 513 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AL392103.1-201ENST00000447000 198 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC090804.1-201ENST00000448870 490 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 CBX1P2-201ENST00000453841 458 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC008571.1-201ENST00000467232 300 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 RPL23AP72-201ENST00000492447 435 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 OR7H2P-201ENST00000513483 306 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC023157.2-201ENST00000540596 141 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC018552.3-201ENST00000567416 561 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC004805.2-201ENST00000605382 482 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 AC092608.2-201ENST00000624427 218 ntBASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SHKBP1Q8TBC3 AC245100.2-201ENST00000454544 1679 ntBASIC5.34□□□□□ -1.56
SHKBP1Q8TBC3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SHKBP1Q8TBC3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.56
SHKBP1Q8TBC3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC004817.4-201ENST00000602396 3625 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 SNORA66-201ENST00000384792 133 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 MIR558-201ENST00000384920 94 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 ARF4P3-201ENST00000397387 509 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 RNU2-36P-201ENST00000410361 191 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AL591848.1-201ENST00000413092 322 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC048351.1-201ENST00000420064 602 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 PSMA6P3-201ENST00000428242 164 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC002553.2-201ENST00000453217 340 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 RPS24P16-201ENST00000497294 392 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 MTND4P7-201ENST00000523876 130 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 GNAI2P1-201ENST00000541815 315 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 BNIP3P1-201ENST00000547295 580 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 DUX4L52-201ENST00000549363 777 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 MIR4703-201ENST00000577728 79 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AL008729.2-201ENST00000606393 473 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 MIR8062-201ENST00000621515 85 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AC138965.3-201ENST00000623875 498 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 AP001284.1-201ENST00000528393 2118 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 CASC19-204ENST00000641001 2055 ntBASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHKBP1Q8TBC3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AL022311.1-201ENST00000623726 19416 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 AL161781.1-201ENST00000354277 403 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-593P-201ENST00000364716 112 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 Y_RNA.288-201ENST00000364854 92 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 SNORD116-11-201ENST00000383882 92 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-444P-201ENST00000383988 108 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-1029P-201ENST00000384109 107 ntBASIC5.32□□□□□ -1.56
SHKBP1Q8TBC3 RNU6-328P-201ENST00000390887 106 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms