Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ARL2BPP5-201ENST00000523141 481 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.53□□□□□ -2
LINC01560Q8TB33 AP004242.1-201ENST00000533701 349 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.53□□□□□ -2
LINC01560Q8TB33 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.53□□□□□ -2
LINC01560Q8TB33 AC007687.1-201ENST00000602704 304 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AL445435.1-201ENST00000604232 665 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AC007619.2-201ENST00000605743 379 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AC005014.3-201ENST00000605985 190 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.53□□□□□ -2
LINC01560Q8TB33 AC093673.2-201ENST00000609674 331 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 U1.23-201ENST00000610293 146 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AL592148.2-201ENST00000612210 372 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AL592295.2-201ENST00000612578 206 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 RNU1-68P-201ENST00000615382 146 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 U1.39-201ENST00000621562 146 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AL512506.2-201ENST00000624472 458 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.53□□□□□ -2
LINC01560Q8TB33 MIR4278-201ENST00000636094 69 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 IGHVIII-44-202ENST00000636235 289 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01560Q8TB33 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.53□□□□□ -2
LINC01560Q8TB33 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 HMGB1P5-201ENST00000255320 642 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RNU6-657P-201ENST00000383904 107 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RNU6-1000P-201ENST00000391066 106 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL031679.1-201ENST00000400616 525 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 TMSB4XP8-201ENST00000402089 135 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 MTND4LP20-201ENST00000402379 270 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL079342.2-201ENST00000403367 482 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL138880.1-201ENST00000405824 642 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL355143.1-201ENST00000407101 841 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RNU2-52P-201ENST00000410680 190 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RNA5SP107-201ENST00000411358 122 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 TMSB4XP6-201ENST00000415187 135 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 EI24P1-201ENST00000416584 867 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC006960.1-201ENST00000419980 153 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL139413.1-201ENST00000421309 217 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 NUP35P1-201ENST00000422734 947 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 TMSB4XP1-201ENST00000424567 135 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RPS6P14-201ENST00000425165 719 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 DUTP6-201ENST00000425573 462 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC241584.1-201ENST00000438469 1241 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RPL23AP16-201ENST00000441715 421 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 MTCYBP42-201ENST00000444653 1130 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 HMGB3P6-201ENST00000444896 598 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL162389.1-201ENST00000449233 177 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 SLC31A1P1-201ENST00000451221 567 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AL109933.2-201ENST00000452651 260 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 TRBV26-201ENST00000456572 344 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 CFTRP1-201ENST00000456646 183 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 PABPC1P3-201ENST00000469174 459 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RN7SL330P-201ENST00000469709 307 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC093752.1-206ENST00000511823 336 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RN7SKP244-201ENST00000516513 307 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RNU6-1028P-201ENST00000517164 93 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RPL12P22-201ENST00000519073 490 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 ZNF705CP-201ENST00000530515 889 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AP003385.6-201ENST00000531603 374 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 SULT1C2P1-202ENST00000562418 459 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RNU6-1192P-201ENST00000612197 107 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 RNU6-489P-201ENST00000618289 107 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC073968.1-201ENST00000618594 637 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC010872.1-201ENST00000624225 675 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 AC087821.2-201ENST00000637086 450 ntBASIC2.52□□□□□ -2.01
LINC01560Q8TB33 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01560Q8TB33 DBF4P1-201ENST00000412976 1892 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms