Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RNU6-336P-201ENST00000364891 107 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RNU1-140P-201ENST00000365040 165 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 CENPW-201ENST00000368325 528 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RNU6-128P-201ENST00000383976 107 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RNU6-1222P-201ENST00000384615 107 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 MIR186-201ENST00000384988 86 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 MIR182-201ENST00000385255 110 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 VDAC1P9-201ENST00000412766 841 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RPS5P2-201ENST00000415238 640 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 EIF4EP4-201ENST00000424916 578 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL353572.2-201ENST00000427728 748 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 CYP2C59P-201ENST00000457790 269 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RN7SL148P-201ENST00000467120 279 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 ITIH4-AS1-201ENST00000478366 395 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC140059.1-201ENST00000489238 361 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RN7SL646P-201ENST00000492969 297 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RN7SL833P-201ENST00000498758 284 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC008628.2-201ENST00000502605 298 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC074255.1-201ENST00000511259 501 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC016924.1-202ENST00000512435 447 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RN7SKP190-201ENST00000516079 286 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC027308.1-201ENST00000517993 110 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC115990.1-201ENST00000526957 301 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL132639.1-201ENST00000553698 475 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC005476.1-201ENST00000554427 397 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC022748.1-202ENST00000566323 195 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC009107.2-201ENST00000569580 577 ntTSL 4 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 RN7SL670P-201ENST00000577235 294 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC005154.1-231ENST00000583664 431 ntTSL 4 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 MIR132-201ENST00000591554 101 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 FAM236A-202ENST00000611003 403 ntAPPRIS P5 TSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL020991.1-201ENST00000612314 373 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 ABCC8-220ENST00000612903 183 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 NOP16-208ENST00000616685 472 ntTSL 3 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
SVIPQ8NHG7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SVIPQ8NHG7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 RNU6-655P-201ENST00000362858 107 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 RNA5SP240-201ENST00000365355 128 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 SNORA48-201ENST00000386847 135 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 RNU6-220P-201ENST00000390919 107 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC009804.1-201ENST00000400949 179 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AL445189.1-201ENST00000405722 338 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 RPS19P1-201ENST00000415286 434 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AL355863.1-201ENST00000424331 293 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AL592076.1-201ENST00000424448 303 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AL445584.1-201ENST00000431451 330 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC018693.2-201ENST00000435255 530 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC007969.2-201ENST00000441891 191 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 PA2G4P1-201ENST00000442248 1197 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 RPL21P23-201ENST00000446654 460 ntBASIC3.18□□□□□ -1.9
SVIPQ8NHG7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms